ggKbase home page

scnpilot_p_inoc_scaffold_967_curated_12

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 12044..13267

Top 3 Functional Annotations

Value Algorithm Source
Isocitrate dehydrogenase [NADP] {ECO:0000313|EMBL:AKH41232.1}; EC=1.1.1.42 {ECO:0000313|EMBL:AKH41232.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 407.0
  • Bit_score: 754
  • Evalue 8.60e-215
isocitrate dehydrogenase (EC:1.1.1.42); K00031 isocitrate dehydrogenase [EC:1.1.1.42] similarity KEGG
DB: KEGG
  • Identity: 87.2
  • Coverage: 407.0
  • Bit_score: 740
  • Evalue 2.90e-211
Isocitrate dehydrogenase [NADP] n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YIZ7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 407.0
  • Bit_score: 747
  • Evalue 7.50e-213

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Altererythrobacter atlanticus → Altererythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1224
ATGGCGAAGATCAAGGTCGCGAATCCCGTCGTCGAAATCGATGGCGACGAAATGACGCGCATCATCTGGCAATGGATCCGGGAAAGGCTGATCCAGCCCTATCTCGATATCGATCTCATCTATTACGATCTGTCGGTCCAGAAGCGCGACGAGACGGACGACCAGATCACCGTCGATGCCGCCAATGCCATCAAGCAGCATGGCGTGGGCGTGAAATGCGCCACCATCACCCCGGATGAAGGCCGCGTCACGGAATTCGGCCTCAAGCAGATGTGGAAGAGCCCCAACGGCACTATCCGCAACATCCTGGGCGGCACGATCTTCCGCGAACCGATCGTCATTTCCAACGTCCCCCGCCTGATTCCGGGCTGGACCGATCCCATCGTGGTCGGCCGCCACGCCTTTGGCGACCAGTACCGCGCGACCGACTTCCTCGTCCCCGGCAAGGGCAAGCTGCGCCTGGTGTTCGAAGGCGAAGACGGCACCGTGATCGACCGCGAAGTGTTCAACTTCCCGTCCTCTGGCGTCGCCATGTCGATGTACAACCTCGACGATTCGATCCGCGACTTCGCCCGCGCCAGCATGAACTACGCGCTCAACCGCGGCTGGCCGCTTTACCTCTCCACCAAGAACACGATCATCAAGGCCTATGACGGGCGTTTCAAGGATCTGTTCCAGGAAGTCTACGAGACCGAAGGCTTCAAGGCGAAGTTCGACGAAGCCAAGATCTGGTACGAACACCGCCTGATCGACGACATGGTCGCCTCCGCGCTCAAGTGGAACGGCAAGTTCGTCTGGGCCTGCAAGAACTACGACGGTGACGTGCAGTCGGACCAGGTCGCTCAGGGCTTCGGCTCGCTCGGCCTGATGACCTCCGTGTTGATGACGCCCGACGGCAAGACCGTGGAAGCGGAAGCCGCCCACGGCACCGTGACGCGCCACTATCGCCAGCACGAACAGGGCAAGGCGACCAGCACCAACCCGATCGCCAGCATCTTCGCCTGGACACGCGGCCTGATCTATCGTGGCCGTTTCGACAATACGCCCGACGTGGTGCGCTTTGCCGAAACGCTGGAGAAGGTCTGCATCGAAACCGTGGAAAGCGGCAAGATGACCAAGGATCTGGCGCTGCTGATCGGCCCGGACCAGCCGTGGATGACCACGGAGCAGTTCTTCGAGGCTATCGTGCAGAACCTCGAAACCGAAATGGCCAACTGGGCCTGA
PROTEIN sequence
Length: 408
MAKIKVANPVVEIDGDEMTRIIWQWIRERLIQPYLDIDLIYYDLSVQKRDETDDQITVDAANAIKQHGVGVKCATITPDEGRVTEFGLKQMWKSPNGTIRNILGGTIFREPIVISNVPRLIPGWTDPIVVGRHAFGDQYRATDFLVPGKGKLRLVFEGEDGTVIDREVFNFPSSGVAMSMYNLDDSIRDFARASMNYALNRGWPLYLSTKNTIIKAYDGRFKDLFQEVYETEGFKAKFDEAKIWYEHRLIDDMVASALKWNGKFVWACKNYDGDVQSDQVAQGFGSLGLMTSVLMTPDGKTVEAEAAHGTVTRHYRQHEQGKATSTNPIASIFAWTRGLIYRGRFDNTPDVVRFAETLEKVCIETVESGKMTKDLALLIGPDQPWMTTEQFFEAIVQNLETEMANWA*