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scnpilot_p_inoc_scaffold_2626_curated_15

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 6431..7864

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 476.0
  • Bit_score: 846
  • Evalue 1.50e-242
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33 4.2.1.35); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 476.0
  • Bit_score: 816
  • Evalue 6.30e-234
3-isopropylmalate dehydratase large subunit n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZZC1_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 476.0
  • Bit_score: 846
  • Evalue 1.10e-242

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1434
ATGGCTAGCCGACCCCGCACCCTTTACGAAAAGATCTGGGACGCTCACGAAGTGGAGCGCCGTGAAGACGGCACCAGCATCCTGTTCATCGACCGCCACCTCGTTCACGAGGTGACCAGCCCGCAGGCATTCGAGGCGCTTCGCCTCAGCGGCCGCAAGGTTCGTCGTCCTGAACTGACGCTGGCGGTTCCCGACCACAATCTGCCCACCACCGCGCGCATCGATGCTGCCGGCAAGCGTATTCCCATCGCCGATGTGGAAAGCGCGCAGCAGCTCGCCGCGCTGGAAAAGAACGCACCCGAATTCGGCGTGCGCTATATCGCGCCGACCGACATCAATCAGGGCATCGTCCATGTCGTGGGGCCGGAAACCGGCTTCTCCCTGCCCGGCGCCACTATCGTATGCGGCGATAGCCACACGTCCTGCCACGGCGGCGTGGGCGCGCTGGCCTTCGGCATCGGCACCAGCGAGGTGGAGCACGTGCTCGCCACGCAGACGCTGCTGCTCAAGCAGTCGAAGACGATGGAAATCCGCGTCGAGGGGGACCTGCTGCCCGGCGTGACCGCCAAGGATCTGATCCTGCATATCATCGGCGTGATCGGCACGGCCGGGGGCACTGGCCATGTGATCGAATATCGCGGCAAGGTGTTCGAGGAGATGTCAATCGAAAGCCGCCTGACGGTGTGCAACATGTCGATCGAAGGCGGCGCCCGCGCCGGCCTCGTCGCTCCGGATGAGAAGACCTTCGCCTATCTCAAGGGCCGTGAATACGCGCCCCGTGGTGAAGATTGGGATCACGCCGTTGCATGGTGGACCAGCCTGCGCACCGATGAAGGCGCGACTTTCGACAAGAGCGTGGTGATCAACGCAGCCGATGTGCAGCCCACGGTCACCTGGGGGACCAGCCCGGAAGACACCGTCTCCATCGGCGGCGTAGTTCCCGCGCCGGAAAGCTTTGCCGATCCTTCCAAGCAGAAGGCCGCGCAAGCCAGCCTGGACTACATGGGCCTCACGCCCGGCCAGAAGATGACGGACATTGAAGTCCAGAACATCTTCATCGGTTCCTGCACCAACAGCCGGATCGAGGATCTGCGCGCTGCTGCCAAGGTGCTTGAAGGCCGCAAGAAGGCTGACAATGTGAAATGGGCTATTGTGGTGCCCGGCTCCGGTCTGGTGAAGCGCCAGGCCGAGGAAGAAGGTCTGGACAGGATCTTCATCGAAGCCGGTCTCGAATGGCGCGAACCGGGCTGTTCCGCCTGTCTGGGCATGAACCCCGACAAGGTGCCTGCAGGGGAACGTTGCGCCAGCACCAGCAACCGCAATTTCGTCGGTCGGCAGGGCCCGGGGGCTCGCACCCATCTCGTCAGCCCGGCCATGGCCGCCGCTGCCGCTGTCACCGGCCGCCTTACCGACGTAAGGGAGCTGGTGGATTGA
PROTEIN sequence
Length: 478
MASRPRTLYEKIWDAHEVERREDGTSILFIDRHLVHEVTSPQAFEALRLSGRKVRRPELTLAVPDHNLPTTARIDAAGKRIPIADVESAQQLAALEKNAPEFGVRYIAPTDINQGIVHVVGPETGFSLPGATIVCGDSHTSCHGGVGALAFGIGTSEVEHVLATQTLLLKQSKTMEIRVEGDLLPGVTAKDLILHIIGVIGTAGGTGHVIEYRGKVFEEMSIESRLTVCNMSIEGGARAGLVAPDEKTFAYLKGREYAPRGEDWDHAVAWWTSLRTDEGATFDKSVVINAADVQPTVTWGTSPEDTVSIGGVVPAPESFADPSKQKAAQASLDYMGLTPGQKMTDIEVQNIFIGSCTNSRIEDLRAAAKVLEGRKKADNVKWAIVVPGSGLVKRQAEEEGLDRIFIEAGLEWREPGCSACLGMNPDKVPAGERCASTSNRNFVGRQGPGARTHLVSPAMAAAAAVTGRLTDVRELVD*