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scnpilot_p_inoc_scaffold_2626_curated_17

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 8117..8719

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 200.0
  • Bit_score: 350
  • Evalue 1.40e-93
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 80.1
  • Coverage: 201.0
  • Bit_score: 334
  • Evalue 2.30e-89
3-isopropylmalate dehydratase small subunit n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YI04_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 82.5
  • Coverage: 200.0
  • Bit_score: 350
  • Evalue 1.00e-93

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGGAACCCGTGCGCCAGGTTGAAGGCCGCGCCTATCCTTTCGGGATGAAGAATGTCGATACCGACATCATCATTCCCGCACACTGGCTCAAGACGATCAGCCGCGATGGCCTTGGCCGCGGCGCCTTCGAAGCCCTGCGCAAGGACCCGTCCAACGTCTTCGATCGTGAGGATGTGAAGGGCGCGCCGATCATCGTGGCGGGTGACAATTTCGGCTGCGGCTCAAGCCGCGAACATGCCGCCTGGGCCCTTCTGGACATGGGCGTGAAGGCTGTGATCGCGCCAAGCTTTTCAGATATTTTTTCCGGTAACGCCTTCAAGAACGGTATCCTAACCGTCGTTCTTCCCCAGGAAGCGATCGACCGGCTGATGGAAGTGGCTGAGACCGATCCGATCACGATCGATCTCGAGAACCAGACCGTCACTACGCCTTTTCAGGACCGCTTCACGTTCGAGATCGATTCCTTCCGCAAGCATTGCCTGCTGGAAGGGCTTGACGAAGTCGGGCTCACGCTCGCCCGGGGCGATGCGATTTCCGCTTACGAAGCGCGTCAGGCAAAGGACATGCCCTGGTTCGCAAAGGGCACGGCCCTTGCAGCGTGA
PROTEIN sequence
Length: 201
MEPVRQVEGRAYPFGMKNVDTDIIIPAHWLKTISRDGLGRGAFEALRKDPSNVFDREDVKGAPIIVAGDNFGCGSSREHAAWALLDMGVKAVIAPSFSDIFSGNAFKNGILTVVLPQEAIDRLMEVAETDPITIDLENQTVTTPFQDRFTFEIDSFRKHCLLEGLDEVGLTLARGDAISAYEARQAKDMPWFAKGTALAA*