ggKbase home page

scnpilot_p_inoc_scaffold_4823_curated_1

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(1..882)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent siderophore receptor n=1 Tax=Novosphingobium sp. AP12 RepID=J2GGX1_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 68.4
  • Coverage: 294.0
  • Bit_score: 400
  • Evalue 1.20e-108
Ferrichrome-iron receptor {ECO:0000313|EMBL:GAO55183.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 294.0
  • Bit_score: 405
  • Evalue 5.40e-110
iron complex outermembrane receptor protein; K02014 iron complex outermembrane recepter protein similarity KEGG
DB: KEGG
  • Identity: 69.4
  • Coverage: 294.0
  • Bit_score: 396
  • Evalue 9.60e-108

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 882
ATGACCAAGCCCACCTCGCGCGCCGCGAAGGCTCACGCGTTTCTTGCCCTGTCCTGCGTCGGCTCGGTGCTTGCACCGCAAGCCGCCTATGCACAGGACTCGACCACGGCCCAGGAAGAGCCGCGCGCATTGGGCGGCGTGACCGTCAGCGATACCGCAATCGTAGAAGAACCCGGCCGCAAGCAGGAAAGCCCCAAGGCCACTCGTCCCGTTCGCGATACGCCCCAGACCATCACTGTCATCACCAATAAGGTGATCGAACAGCAGAATCTGCTGACCCTGCGCGACGTATTGTCCACCGTTCCGGGCATCACCTTCGGCGCGGGCGAAGGCGGCGGCGGCTATGGCGACAGCATCAATCTGCGCGGCTATTCCGCCAATACCGACATTACCACCGATGGCGTGCGCGACAGCGCCCAGTACAGCCGCACCGATCCGTTCAACATGGAACAGATCGAAGTGACCAATGGCGCCAATTCGGTGACGGCAGGGTCGGGCTCGGTTGGCGGTTCGATCAACCTCGTCACCAAGCGCCCCAAGGCCGATACGGAATATAACGCCACGATGGGCGTCGGCACCGAGGATTATCTGCGCGGCACGGCGGACATCAATGTCCGCGCCAACGATCTGATCGCTTTCCGCCTCAACGCCATGGCGCACCGCAATGACGTACCGGGCCGCGATTACGAGGAATATAGCCGCTGGGGCGTTGCTCCCTCCGTCACCATCGGGATGGAGAAGGACACCAGGCTGACGCTGCAATATTTCCACCAGGAAGATACAAACACGCCGCAATATGGCCTGCCCTATTTCAACAATGGGGTGACCGACGGCATGCTGCCGGGCGTGGATCGCGCTTCCTATTACGGCAACCGCAACGTC
PROTEIN sequence
Length: 294
MTKPTSRAAKAHAFLALSCVGSVLAPQAAYAQDSTTAQEEPRALGGVTVSDTAIVEEPGRKQESPKATRPVRDTPQTITVITNKVIEQQNLLTLRDVLSTVPGITFGAGEGGGGYGDSINLRGYSANTDITTDGVRDSAQYSRTDPFNMEQIEVTNGANSVTAGSGSVGGSINLVTKRPKADTEYNATMGVGTEDYLRGTADINVRANDLIAFRLNAMAHRNDVPGRDYEEYSRWGVAPSVTIGMEKDTRLTLQYFHQEDTNTPQYGLPYFNNGVTDGMLPGVDRASYYGNRNV