ggKbase home page

scnpilot_p_inoc_scaffold_915_curated_21

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 19273..20085

Top 3 Functional Annotations

Value Algorithm Source
arabinose ABC transporter permease n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B65EBA similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 269.0
  • Bit_score: 427
  • Evalue 8.70e-117
MFS permease {ECO:0000313|EMBL:GAO55527.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 270.0
  • Bit_score: 432
  • Evalue 5.00e-118
major facilitator superfamily permease similarity KEGG
DB: KEGG
  • Identity: 75.6
  • Coverage: 270.0
  • Bit_score: 411
  • Evalue 2.70e-112

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 813
ATGATTCCGCAGCTTGGCGCTCCGCTGGGTCTGATCGTGGCCAGCCTGCTTTTCGCCTTCTTCACTGCCACTCTTCCGGCCGAGGATTTCCTTGAATGGGGCTGGCGCTTCCCCTTCTTCGTCGCTTTCGCAATCAACGTGGTGGCCCTGTTCGCGCGTCTGCGCATCGTGGTGACGCCGGAATTCCGCCGCCTATTCGAAACGCGCGACTTGCAGCCGGAAAGCCCGCTCGCCACTTTGCGGACCGAATGGAAGACCATCGTGATAGGCGCTTTCGCCCCGCTGGCCAGCTTTGCGCTGTTTCACATGGTCACCGTTTTCCCGCTGTCATGGGTATTCCTGTTCACGGAGGAAACGCCCACCCGCTTCCTGTTAATCGAAAGCGCGGCTGCGGCATTCGGTGTGGCGGCCATCATCATCTCCGGCCTGCTGGCCGACCGGATCGGTCGCCGCCGTGTGCTGGGCTATTCGGCGCTGGCCATCGCGATCTTCAGCGGCTTTGCGCCCCAACTTCTGGACTTAGGCGAAGGCGGCGAAATCGCCTTCATGCTGACCGGCTTCATCATTCTGGGCCTGGCATTCGGCCAGTCTTCGGGCGCGGTCTCGGCGAATTTCGCCAATCGCCACCGTTACACCGCCTCGGCGATGACAAGCGACCTTGCCTGGCTGTTCGGCGCCGGCTTCGCTCCCCTCGTCGCCCTGTGGCTCTCCGCCAATCTGGGGCTGCTCGCATCGGGCGCCTATCTATTGTCAGGCGCGCTCGCCACGCTGGTTGCACTGTGGCTCAACAGTGAGCTGGGCAAGAACCGCTGA
PROTEIN sequence
Length: 271
MIPQLGAPLGLIVASLLFAFFTATLPAEDFLEWGWRFPFFVAFAINVVALFARLRIVVTPEFRRLFETRDLQPESPLATLRTEWKTIVIGAFAPLASFALFHMVTVFPLSWVFLFTEETPTRFLLIESAAAAFGVAAIIISGLLADRIGRRRVLGYSALAIAIFSGFAPQLLDLGEGGEIAFMLTGFIILGLAFGQSSGAVSANFANRHRYTASAMTSDLAWLFGAGFAPLVALWLSANLGLLASGAYLLSGALATLVALWLNSELGKNR*