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scnpilot_p_inoc_scaffold_2173_curated_12

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 10089..11000

Top 3 Functional Annotations

Value Algorithm Source
ligB; protocatechuate 4,5-dioxygenase subunit beta; K04101 protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8] similarity KEGG
DB: KEGG
  • Identity: 90.7
  • Coverage: 300.0
  • Bit_score: 587
  • Evalue 2.30e-165
Protocatechuate 4,5-dioxygenase beta chain {ECO:0000313|EMBL:BAK65925.1}; EC=1.13.11.8 {ECO:0000313|EMBL:BAK65925.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 300.0
  • Bit_score: 587
  • Evalue 1.00e-164
Protocatechuate 4,5-dioxygenase beta chain n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQQ3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 300.0
  • Bit_score: 587
  • Evalue 7.40e-165

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Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGGCACGCGTTACCACGGGCATTACGTCCAGCCACATCCCCGCGCTGGGCGCCGCCCTGCAGACCAAGACTTCGGACAATGATTACTGGGGTCCGGTCTTCAAGGGCTACGAGCCGATCAAGGAATGGATCAAGCAGCCGGGCAACATGCCCGACGTGGTGGTGCTGGTTTATAACGACCACGCCTCCGCCTTCGACATGAATGTGATCCCCACCTTCTCGATCGGTTGCGCCGAAAGCTTCAAGCCCGCCGACGAAGGCTGGGGCCCGCGCCCCGTGCCCGACGTGATCGGCCATCCGGACCTCGCCTGGCACATTGCCCAGAGCCTGATCCTCGACGATTTCGACATGACCATCTTCAACAAGATGGACGTGGACCACGGCTGCACCGTGCCGCTGTCGATGATGTTCGGCGAGCCCGATGCATGGCCTTGCAAGGTCATTCCCTTCCCCGTCAACGTGGTGACCTATCCGCCGCCGTCGGGCCGTCGCTGCTTCAACCTGGGTGACAGCATCAAGGCTGCGGTGGAAAGCTTCCCCGAAGACCTGAACGTCCATGTCTGGGGCACGGGCGGCATGAGCCACCAGTTGCAGGGTCCGCGCGCGGGCCTGATCAACAAGGAATTCGATCTCAACTTCATCGACAAGCTGATCGAAGACCCCGAAACCCTCAGCAAGATGCCGCATATCGAATATCTGCGCGAAGCAGGCAGCGAAGGTATCGAACTGGTGATGTGGCTGATCATGCGCGGCGCGCTGGGCGAGAAGGTGAAGGATCTCTACACTTTCTACCACATCCCCGCCTCCAACACCGCGCTGGGCGCGCTGCTGCTCCAGCCGGAAGAAACGGCCGGCACCCCGCTCGAACCGCGCAAGGTGATGAGCGGCCACAGCCTCACCGCCGGGGCCTGA
PROTEIN sequence
Length: 304
MARVTTGITSSHIPALGAALQTKTSDNDYWGPVFKGYEPIKEWIKQPGNMPDVVVLVYNDHASAFDMNVIPTFSIGCAESFKPADEGWGPRPVPDVIGHPDLAWHIAQSLILDDFDMTIFNKMDVDHGCTVPLSMMFGEPDAWPCKVIPFPVNVVTYPPPSGRRCFNLGDSIKAAVESFPEDLNVHVWGTGGMSHQLQGPRAGLINKEFDLNFIDKLIEDPETLSKMPHIEYLREAGSEGIELVMWLIMRGALGEKVKDLYTFYHIPASNTALGALLLQPEETAGTPLEPRKVMSGHSLTAGA*