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scnpilot_p_inoc_scaffold_2173_curated

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Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2173_curated_1
Paenibacillus sp. D9, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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1..444
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Brevibacillus brevis RepID=UPI00036A37CF
1,2-oxophytodienoate reductase {ECO:0000313|EMBL:KKC48933.1}; TaxID=665792 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. D9.;"
NADH:flavin oxidoreductase/NADH oxidase
scnpilot_p_inoc_scaffold_2173_curated_2
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

543..1505
DNA (963bp) protein (321aa)
NAD-dependent epimerase/dehydratase; K00329 NADH dehydrogenase [EC:1.6.5.3]; K00356 NADH dehydrogenase [EC:1.6.99.3]
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZY55_9SPHN
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:KHS44145.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
scnpilot_p_inoc_scaffold_2173_curated_3
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1692..2996
DNA (1305bp) protein (435aa)
Soluble aldose sugar dehydrogenase YliI {ECO:0000313|EMBL:AKH42933.1}; EC=1.1.5.- {ECO:0000313|EMBL:AKH42933.1};; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Glucose/sorbosone dehydrogenase n=2 Tax=Congregibacter RepID=A4A714_9GAMM
hypothetical protein
scnpilot_p_inoc_scaffold_2173_curated_4
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3147..4475
DNA (1329bp) protein (443aa)
Putative drug resistance transporter n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A2Q5_9SPHN
major facilitator superfamily transporter; K08217 MFS transporter, DHA3 family, macrolide efflux protein
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
scnpilot_p_inoc_scaffold_2173_curated_5
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4427..5347)
DNA (921bp) protein (307aa)
2-pyrone-4,6-dicarbaxylate hydrolase {ECO:0000313|EMBL:AKH42937.1}; EC=3.1.1.57 {ECO:0000313|EMBL:AKH42937.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
amidohydrolase; K10221 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57]
2-pyrone-4,6-dicarboxylate hydrolase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4CAFF
scnpilot_p_inoc_scaffold_2173_curated_6
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5428..6486)
DNA (1059bp) protein (353aa)
4-oxalomesaconate tautomerase {ECO:0000313|EMBL:AKH42938.1}; EC=5.3.2.8 {ECO:0000313|EMBL:AKH42938.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
methylitaconate delta2-delta3-isomerase (EC:5.3.3.6); K09788 hypothetical protein
Methylitaconate delta2-delta3-isomerase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9CCM9_9SPHN
scnpilot_p_inoc_scaffold_2173_curated_7
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6488..7162)
DNA (675bp) protein (225aa)
4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase; K10218 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F1Q8_SPHCR
Uncharacterized protein {ECO:0000313|EMBL:KHL24483.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
scnpilot_p_inoc_scaffold_2173_curated_8
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7438..8307
DNA (870bp) protein (290aa)
6-phosphogluconate dehydrogenase, NAD-binding n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EH07_9SPHN
NAD binding domain of 6-phosphogluconate dehydrogenase {ECO:0000313|EMBL:AKH42940.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
6-phosphogluconate dehydrogenase
scnpilot_p_inoc_scaffold_2173_curated_9
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8325..9350
DNA (1026bp) protein (342aa)
amidohydrolase; K10220 4-oxalmesaconate hydratase [EC:4.2.1.83]
UPI0003D0230A related cluster n=1 Tax=unknown RepID=UPI0003D0230A
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
scnpilot_p_inoc_scaffold_2173_curated_10
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9347..9670
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00031B9ABA
Uncharacterized protein {ECO:0000313|EMBL:AKH42942.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein; K09956 hypothetical protein
scnpilot_p_inoc_scaffold_2173_curated_11
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9667..10086
DNA (420bp) protein (140aa)
ligA; protocatechuate 4,5-dioxygenase subunit alpha; K04100 protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
Protocatechuate 4,5-dioxygenase alpha chain {ECO:0000313|EMBL:BAK65926.1}; EC=1.13.11.8 {ECO:0000313|EMBL:BAK65926.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Protocatechuate 4,5-dioxygenase alpha chain n=4 Tax=Sphingomonadaceae RepID=PCYA_SPHPI
scnpilot_p_inoc_scaffold_2173_curated_12
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10089..11000
DNA (912bp) protein (304aa)
ligB; protocatechuate 4,5-dioxygenase subunit beta; K04101 protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
Protocatechuate 4,5-dioxygenase beta chain {ECO:0000313|EMBL:BAK65925.1}; EC=1.13.11.8 {ECO:0000313|EMBL:BAK65925.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Protocatechuate 4,5-dioxygenase beta chain n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQQ3_9SPHN
scnpilot_p_inoc_scaffold_2173_curated_13
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11082..12038
DNA (957bp) protein (319aa)
ligC; 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase; K10219 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9L2M1_9SPHN
4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase {ECO:0000313|EMBL:EIZ78529.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;"
scnpilot_p_inoc_scaffold_2173_curated_14
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12207..13193
DNA (987bp) protein (329aa)
General stress protein 69 {ECO:0000313|EMBL:AKH42947.1}; EC=1.1.1.- {ECO:0000313|EMBL:AKH42947.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
aldo/keto reductase n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225ED49
aldo/keto reductase
scnpilot_p_inoc_scaffold_2173_curated_15
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13231..14055
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4H7_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:AKH42948.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2173_curated_16
unknown

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comp(14015..14890)
DNA (876bp) protein (292aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2173_curated_17
unknown

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15918..16205
DNA (288bp) protein (96aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2173_curated_18
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16238..17167)
DNA (930bp) protein (310aa)
Putative oxidoreductase SadH {ECO:0000313|EMBL:AKH42952.1}; EC=1.-.-.- {ECO:0000313|EMBL:AKH42952.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
short-chain dehydrogenase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B3B68C
short-chain dehydrogenase/reductase SDR
scnpilot_p_inoc_scaffold_2173_curated_19
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17239..17937
DNA (699bp) protein (233aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IKZ0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH42953.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_2173_curated_20
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17937..18413
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQR9_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65941.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
scnpilot_p_inoc_scaffold_2173_curated_21
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18439..18864
DNA (426bp) protein (142aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQR9_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65941.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
scnpilot_p_inoc_scaffold_2173_curated_22
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18900..20033
DNA (1134bp) protein (378aa)
ligW2; 5-carboxyvanillate decarboxylase; K14333 2,3-dihydroxybenzoate decarboxylase [EC:4.1.1.46]
Amidohydrolase 2 n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KT60_9BURK
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
scnpilot_p_inoc_scaffold_2173_curated_23
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20196..22661
DNA (2466bp) protein (822aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00037F2C20
Uncharacterized protein {ECO:0000313|EMBL:AJP71714.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
TonB-dependent receptor-like protein
scnpilot_p_inoc_scaffold_2173_curated_24
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23048..25393
DNA (2346bp) protein (782aa)
TonB-dependent receptor n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4I4_NOVAD
TonB-dependent receptor {ECO:0000313|EMBL:KHS44150.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
TonB-dependent receptor
scnpilot_p_inoc_scaffold_2173_curated_25
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25555..25962
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000372B9DA
glutathione-dependent formaldehyde-activating protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
scnpilot_p_inoc_scaffold_2173_curated_26
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26026..27135)
DNA (1110bp) protein (370aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000313|EMBL:AKH42955.1}; EC=2.1.1.14 {ECO:0000313|EMBL:AKH42955.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJR7_9SPHN
scnpilot_p_inoc_scaffold_2173_curated_27
unknown

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comp(27873..28943)
DNA (1071bp) protein (357aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2173_curated_28
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29130..29441
DNA (312bp) protein (104aa)
Quinohemoprotein alcohol dehydrogenase ADH IIB {ECO:0000313|EMBL:AKH42956.1}; EC=1.1.9.1 {ECO:0000313|EMBL:AKH42956.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
alcohol dehydrogenase; K00114 alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
Alcohol dehydrogenase large subunit n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IKX4_9SPHN
scnpilot_p_inoc_scaffold_2173_curated_29
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29600..31114
DNA (1515bp) protein (505aa)
Phenylacetaldehyde dehydrogenase {ECO:0000313|EMBL:AKH42957.1}; EC=1.2.1.39 {ECO:0000313|EMBL:AKH42957.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
aldehyde dehydrogenase (EC:1.2.99.3); K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
Aldehyde dehydrogenase (Acceptor) n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4B8_NOVAD
scnpilot_p_inoc_scaffold_2173_curated_30
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31185..32057
DNA (873bp) protein (291aa)
Amidohydrolase 2 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4B9_NOVAD
Amidohydrolase {ECO:0000313|EMBL:AKH42958.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
amidohydrolase; K07045
Displaying items 1-30 of 39 in total

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