ggKbase home page

scnpilot_p_inoc_scaffold_3941_curated_6

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: 6040..8847

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Caulobacter crescentus OR37 RepID=R0EKW1_CAUCE similarity UNIREF
DB: UNIREF100
  • Identity: 59.9
  • Coverage: 910.0
  • Bit_score: 1110
  • Evalue 0.0
TonB-dependent receptor subfamily {ECO:0000313|EMBL:AJA10964.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.3
  • Coverage: 928.0
  • Bit_score: 1316
  • Evalue 0.0
Outer membrane receptor protein similarity KEGG
DB: KEGG
  • Identity: 25.6
  • Coverage: 999.99
  • Bit_score: 251
  • Evalue 9.30e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis fribergensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2808
ATGGAACATCCTGTCTCTTGCCGTGCTCTGAAACGGTCCCTTTTCTATTCTGCCGGCCTTGTCGCTCTGCTCGCCGCAGGCACTGCCGCCCATGCTGCAGATGCGAACAATTCTGACATTGTCGTCACCGGCCAGAAGCTGAGCGTCGAAAGCGCGATCGCCGCCAAGAAAGACGCCGCGACCGTTATCGACGAGGTTTCTGCCGACGATCTGGGCAAGCTGCCCGATGCCAATGTGGCCGATGCGCTTGCGCGCCTTCCCGGCGTCAACGTGGTGGTGAACCAGGACACGGGCGAAGGCGAATATGTGACCATTCGCGGCTTCTCCGGCACTTATAACGCCGTCACCGTGAACGGCGTGCGCGTCGCCCAGACCGATCCCAGCAGTCGCGACGTTTCGCTCAGCGTGCTGCCGCCCAATGGCCTTGCAGCCATCCGCGTGACCAAGACGATCACTCCCGATCAGGAAGGCGATGCCATTGCGGGCATCATCGATTTCCGCACCCCCACCGCTTTCGATTTTGCCAAGCCCACTACTGTGCGCCTCTACGCCAATGGCGGGATCAATGGCCGGGCCCATTCAGCCGATGAGGACGCCGCGATCTATCAGGGCCAGGTGGATTTCGCCCACCGCTTCGCCGATGACCGCTTCGGCATCTTCGCCTCCGCCAATTACGGCGTGTCCCATGGCAACGGCCAGGAAACCGAGAATGACGGCGAGTGGGAGCCGCATATCTGGCGCAAGAACTCGACCGAGGCGATTTCCGAACAGAACATGCACCTGCCCGGCATCGATCTGGATTATCGCCGCGTGAAGCAGACCCGTTTTGGCGGTAATCTGTCCTTCGATTATCGCGGCGACACCACCGAGCTTTATATACGCGGCCAATATGCCCGGCAGGAACTGGTCGGCACCAATGATTACACCGATTACCGCAACCGCCCAACCGCGCGCCTGACACAGGTAAATCTGGAAGACACCAGCCTGCGCCAGCCTGAAGACATGGTGATCGGACACGACGATGTGCTGGGCAATATCTATGGCTACACCACGGCCCAGATCGTCGACACGGACCATGACGGCAAGATCACCGATGCGGACCGTTCTTCCAGCAAATATTGGTCACTCAACGGCCGTTCCGGCGTGTGGGACCCGAAGGCGTTCCAGTTCGCCCGCAGCTTCTCCACCATCGACACGACCCAGACGCTCGGCACGGTCGAATTCGGCGGCAAGAGCAAGCTGGGCGCGCTGACGCTGAATTACAGCGCCAGCTATTCGGGCGGCGCGCGCGAGAACCCGGACAGCTATTCGATCGGCTATAATTGCGACAAATGCACTTATCCGCTGAATGCTACGGGCATCGACTGGGTCTCCAACGATCCGCGCTTCCCCCATGCCAGCCTGCCCGCCTATGCCGTGCCGGTTGAAACCGATAGTTCGCTGCTGCCCTTCGATGGCGCCAGCCATTCGCGTTCCAAGCAGACTGACAGCCGCTTCGCCGCCAAGCTCGATGCCCGTTACGATGTCGGCAACACGCTGGATTACATTCAGGCCGGCGCCAAATGGCTGCGTTCCAAGCGTGAATACGACAATACGCCGATCTGGGACGGTGATTTCTCCGGCACTCCGCTGGATGGCCTGAACCTCGATAAATCGGGCTTGGTGGACAAGGAAGTCACCAGCATGCTGGGGGGCCAGTATTATTATGGCGACGTGTTCAACCGCGAAGCCGTGATTGCCGCCATCAAGGCCGCCGAAGCCGCCAATCCCGATAGCGTCAGCGAGGAAGATCTGCTGCGCGACGACAAGCGCGGAACGGAAAGCGTCTATTCCGCCTATGCCCTGGCCGCATTCAAATGGGATGAAGTGAAGCTGATTGCGGGCGCGCGGCTGGAACATCGCGACATTCACAACACCTTCTGGGTGGACGATGGCGACAACAGCGGCTTCGGCAGCTCCAGCAGCAAATATACGATCGTGCTGCCGAGCATCACTGCGACTTATCGCCCGAATGACAAGGTCGCCATTCGCGGGGCCCTGTGGACCGGCTATTCACCGCCGGAATATGGAAACGTCTCGGCCGGCCAGTCTATCACGCGGGACGAGACGACCAAGGAAATCATCGCCATCAGCCAGGGCAATCCCGACCTTAAGCCCGCCAAGGCCTATAATGCGGACCTCTCGCTGGAGGTCTATCCCGACCGGTCGAGCATCGTCTCGGTCTCCGGCTATTACAAGCACATCACGGACTTCATCTTCACCAATGGCAATCAGGTGGATGCCGATACCACGGTGGGTTCCATCATCATCACTCAGCCGAAAAATGGCGAGACGGCCGAAGTCTATGGCGTGGAAATGAACCTCATCAAGGGTTTCGACGGGCTGCCCGCGCCGTTTGACGGCTTCGGCTTCGAGGGCAACCTGACCCTTCAGCACAGCGAATCCGAAAGTGGGCTGGATTATCGCGCGGGTGAGAAGATGCGCCTCGTGAATACGCCGCATGTCCTCTACAATGTGGCGCTCACCTTCCAGAAGTTCGGCTTCGAGGCGAAGCTGTCCTACAATTATCGCGGCAAGTTCATCGAAGATCTGCGCGACAATGCGGTGGACAAATGGGTGCAGCACAATCGCAGCGTGGACCTGCACACGCGCTACAATTTCAGCAAGAACCTCGCTCTCGATTTCGACGTGGGCAATCTGCTGAACGATTGGAAATACTACACCACCAAGGGCGACAATCCTTCCTATCAGAAGGATTATCTGGAGCCGGGCCGCACTTTCCTGGCGCGCCTGAGCTACACTTACTGA
PROTEIN sequence
Length: 936
MEHPVSCRALKRSLFYSAGLVALLAAGTAAHAADANNSDIVVTGQKLSVESAIAAKKDAATVIDEVSADDLGKLPDANVADALARLPGVNVVVNQDTGEGEYVTIRGFSGTYNAVTVNGVRVAQTDPSSRDVSLSVLPPNGLAAIRVTKTITPDQEGDAIAGIIDFRTPTAFDFAKPTTVRLYANGGINGRAHSADEDAAIYQGQVDFAHRFADDRFGIFASANYGVSHGNGQETENDGEWEPHIWRKNSTEAISEQNMHLPGIDLDYRRVKQTRFGGNLSFDYRGDTTELYIRGQYARQELVGTNDYTDYRNRPTARLTQVNLEDTSLRQPEDMVIGHDDVLGNIYGYTTAQIVDTDHDGKITDADRSSSKYWSLNGRSGVWDPKAFQFARSFSTIDTTQTLGTVEFGGKSKLGALTLNYSASYSGGARENPDSYSIGYNCDKCTYPLNATGIDWVSNDPRFPHASLPAYAVPVETDSSLLPFDGASHSRSKQTDSRFAAKLDARYDVGNTLDYIQAGAKWLRSKREYDNTPIWDGDFSGTPLDGLNLDKSGLVDKEVTSMLGGQYYYGDVFNREAVIAAIKAAEAANPDSVSEEDLLRDDKRGTESVYSAYALAAFKWDEVKLIAGARLEHRDIHNTFWVDDGDNSGFGSSSSKYTIVLPSITATYRPNDKVAIRGALWTGYSPPEYGNVSAGQSITRDETTKEIIAISQGNPDLKPAKAYNADLSLEVYPDRSSIVSVSGYYKHITDFIFTNGNQVDADTTVGSIIITQPKNGETAEVYGVEMNLIKGFDGLPAPFDGFGFEGNLTLQHSESESGLDYRAGEKMRLVNTPHVLYNVALTFQKFGFEAKLSYNYRGKFIEDLRDNAVDKWVQHNRSVDLHTRYNFSKNLALDFDVGNLLNDWKYYTTKGDNPSYQKDYLEPGRTFLARLSYTY*