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scnpilot_p_inoc_scaffold_3941_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3941_curated_1
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..189)
DNA (189bp) protein (63aa)
Phosphonoacetaldehyde hydrolase {ECO:0000256|HAMAP-Rule:MF_01375}; Short=Phosphonatase {ECO:0000256|HAMAP-Rule:MF_01375};; EC=3.11.1.1 {ECO:0000256|HAMAP-Rule:MF_01375};; Phosphonoacetaldehyde phosphonohydrolase {ECO:0000256|HAMAP-Rule:MF_01375}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
phosphonoacetaldehyde hydrolase (EC:3.11.1.1); K05306 phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
UPI0003D5AFF6 related cluster n=1 Tax=unknown RepID=UPI0003D5AFF6
scnpilot_p_inoc_scaffold_3941_curated_2
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(200..1321)
DNA (1122bp) protein (374aa)
UPI0003D5A6FC related cluster n=1 Tax=unknown RepID=UPI0003D5A6FC
FAD dependent oxidoreductase {ECO:0000313|EMBL:AJA10961.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
FAD dependent oxidoreductase
scnpilot_p_inoc_scaffold_3941_curated_3
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1302..2543)
DNA (1242bp) protein (414aa)
UPI0003D5C278 related cluster n=1 Tax=unknown RepID=UPI0003D5C278
Uncharacterized protein {ECO:0000313|EMBL:AJA10960.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3941_curated_4
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2772..4910)
DNA (2139bp) protein (713aa)
phospholipase C, phosphocholine-specific (EC:3.1.4.3); K01114 phospholipase C [EC:3.1.4.3]
UPI0003D5EE0E related cluster n=1 Tax=unknown RepID=UPI0003D5EE0E
Scaffold22, whole genome shotgun sequence {ECO:0000313|EMBL:KIS30577.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
scnpilot_p_inoc_scaffold_3941_curated_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5034..5603
DNA (570bp) protein (190aa)
phosphohydrolase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CCBF8
Uncharacterized protein {ECO:0000313|EMBL:GAO53075.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3941_curated_6
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6040..8847
DNA (2808bp) protein (936aa)
TonB-dependent receptor n=1 Tax=Caulobacter crescentus OR37 RepID=R0EKW1_CAUCE
TonB-dependent receptor subfamily {ECO:0000313|EMBL:AJA10964.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
Outer membrane receptor protein
scnpilot_p_inoc_scaffold_3941_curated_7
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8969..9673
DNA (705bp) protein (235aa)
UPI0003D649A9 related cluster n=1 Tax=unknown RepID=UPI0003D649A9
Scaffold22, whole genome shotgun sequence {ECO:0000313|EMBL:KIS30575.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
GntR family transcriptional regulator
scnpilot_p_inoc_scaffold_3941_curated_8
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9837..11237
DNA (1401bp) protein (467aa)
Vanillin dehydrogenase {ECO:0000313|EMBL:AKH42969.1}; EC=1.2.1.67 {ECO:0000313|EMBL:AKH42969.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Vanillin dehydrogenase n=2 Tax=Sphingomonadaceae RepID=G2IMC6_9SPHN
ligV; vanillin dehydrogenase
scnpilot_p_inoc_scaffold_3941_curated_9
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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11295..11789
DNA (495bp) protein (165aa)
SnoaL-like polyketide cyclase family protein 2 n=1 Tax=Achromobacter piechaudii HLE RepID=J4Y065_9BURK
hypothetical protein
Tax=RBG_16_Gamma2_60_9_curated
scnpilot_p_inoc_scaffold_3941_curated_10
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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11827..13479
DNA (1653bp) protein (551aa)
tannase and feruloyl esterase; K09252 feruloyl esterase [EC:3.1.1.73]
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000303247E
Tannase and feruloyl esterase {ECO:0000313|EMBL:AKH41398.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
scnpilot_p_inoc_scaffold_3941_curated_11
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13476..13931)
DNA (456bp) protein (152aa)
MarR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INY8_9SPHN
MarR family protein {ECO:0000313|EMBL:AKH42233.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
MarR family transcriptional regulator
scnpilot_p_inoc_scaffold_3941_curated_12
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14015..14497
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4119F
Uncharacterized protein {ECO:0000313|EMBL:AKH41116.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3941_curated_13
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14504..14962
DNA (459bp) protein (153aa)
Cocaine esterase {ECO:0000313|EMBL:AKH41117.1}; EC=3.1.1.84 {ECO:0000313|EMBL:AKH41117.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hydrolase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6DCC1
putative hydrolase; K06978
Displaying 13 items

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