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scnpilot_p_inoc_scaffold_1099_curated_14

Organism: scnpilot_dereplicated_Sphingomonadales_1

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(11605..13926)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.1
  • Coverage: 755.0
  • Bit_score: 1198
  • Evalue 0.0
ribonuclease R (EC:3.1.-.-); K12573 ribonuclease R [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 757.0
  • Bit_score: 1170
  • Evalue 0.0
Ribonuclease R n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZW13_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 755.0
  • Bit_score: 1198
  • Evalue 0.0

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2322
ATGCCTGCCCCGAAAAATACGTCATCTTCAAGAAATGCGCCTTCGCCCAAGAAGGCTCGCCGCCCCAGGCCCGCTATTCCCGGCCTGCCGACGCGCGAACAGATTCTCGAATTCATCGAGACATCCAACGAGCCCGCCGGAAAGCGGGAGATCGCGCGCGCTTTCGGCCTCAAGGGGCAGGAGAAGATTTCGCTCAAGCGGCTGCTCAGCGACATGGCCGACGAGGGGCTGATCGACGGGAAGAAAACCGCGTTCCACCGCATGGGCGGCGTGCCGAAGGTCACGGTTTTGCGAGTGGTGGAGATCGACGACGGGGAGGCTCTGGCCATTCCCGACAGCTGGTCGCCTGATGACGGCGCCCCGCCGCCGCGCCTGCGGCTGATCGAAAAGAAACGCGGCCCGGGCAGACAGGCTGCGGTCAAGATGGGCGACCGGGTGCTCGCCCGCACCGAGGAAACCCAGACCGGATGGATCGCCTATCCGATGAAGGTGCTCGCCTCCGCCGACGAAAGCGTGATGGGCGTGGTGGAGATCGACGGCTCGGGCAAGGGCTGGCTCGCCCCAGTGGACAAGCGCATTCGCCATTCCCCGCCCATTGCCGATCTTGGCGGAGCGGAGGGCGGTCAGCTTGTTCTGGCGGAACCCGCCGGACGTTCGCCCCGCGCCGGGGTGAAGGTGGTGCAGGTCCTGGGCGATCCGCTGGCGCCCAAGGCATTCAGCCTGATCGCCATCGCGAAATATGGCATCCCCTTCCATTTCGCGAATGAGACGCTGGAAGAGGCGAAGCTGGCGGCGAAACTGCCGCTGAGCGAGGAGAGGCGCGAGGATCTGCGCCATATCCCCATTGTCGCCATCGATCCTGCCGATGCGCGCGACCATGACGATGCGATATGGGCCGAGCCGGACGGGAAGGGCGGCTTCAACGCCATCGTCGCCATCGCAGATGTCAGCTTCTATGTTCGCCCCGGCGGCAAGCTGGACCGGGAGGCGAGGAAGCGCGGCAATTCGGTATATTTCCCTGACCGGGTCGTGCCGATGCTGCCGGAGATCCTCAGCGCGGATGTCTGCTCGCTCAAGGAAGGGCAGGATCGCGCGGCAATGGCTTGCCACCTCTCCATCGACGCCAGCGGCAATGTGAAGGCATGGCGCTTCACCCGCGCCATCGTCCGGATCGCCAGTAATATTGCCTATGAGAACGCGCAGGCGGCCATTGATGATGGTTCCGCCGACGATGTGCTGAAGAACCTGTGGGCCTGCTGGCATGCGCTGGCCGATGCCCGCAACAAGCGCGATCCGCTGGAACTGGAATTGCCTGAGCGGCGCGTGGTGCTGGACGAGAAGGGCCGCATTGCCGAAATCGCCATCCGCGAACGGCTCGATGCCCACCGCGTGGTGGAAGATTTCATGATCGCAGCCAATGTCGCGGCGGCCAAGGCCCTGGAAAGCAAAGCGCATCCGGTGGTCTATCGTATCCACGAACCGCCGAGCCGGGAAAAGCTGGTCGCCCTGCGCGAATATCTCCAGACTTTCGAGAAGAAGCTCTCGCTCGGCCAGGTCATCACGCCCGGCCTGTTCAACCGCATGTTGAAGGATGTCGCGGATGAGAGCGAGAAGGCGCTGATCATGGAGGCCGTGCTGCGCAGCCAAACGCAGGCCTATTACGGCCCGCGCAATGCCGGCCATTTCGGCCTCGCGCTGGGCAGCTATGCCCATTTCACTTCACCGATCCGCCGCTATGCCGACCTTCTGGTGCATCGTGCGCTGGTGGATGCCTTCGGCCTCGAACAGCCGAAACCGAAGGACGATCTGCCCGAGACTTCGGGCCTGTCAGACCGCGACCGCGCCGATCTGGAACGCGTGAGCGAAGCGATCAGCAGTGCCGAACGCCGCGCCATGGAAGCAGAGCGGGAAACCAGCGACCGCTATGTCGCCGCATGGCTGTCCGGCCGGGTGGGCGAAGTTTTCGACACGCGGATCACCGGGGTCCAGAAATTCGGCTTCTTCGCCACTATCATTGCCCTCGGCGGGGACGGGCTGGTGCCCGTTTCCACGCTGGGCAACGATTATTATCATTACGACGATTCCGCGCAGGCCCTGGTGGGTGAACGCACGCGCACGATCTATGCGATGGGCGACCGGCTGAAGCTGCGCTTGGCGGAGGCTAATCCGCTGACCGGCGCGCTCAAGTTTGAACTACCCGAAGGCGGCAGTGCGCCCATAGAACCGCGAGGTTCCAAGATGGAGCCCAGGAAGAAGGGCAAGCATATCGTCGGCAAGCGCGGCCGGCCGGGGAATATCCGGCATCAGGGGAAGAAGCGGTAA
PROTEIN sequence
Length: 774
MPAPKNTSSSRNAPSPKKARRPRPAIPGLPTREQILEFIETSNEPAGKREIARAFGLKGQEKISLKRLLSDMADEGLIDGKKTAFHRMGGVPKVTVLRVVEIDDGEALAIPDSWSPDDGAPPPRLRLIEKKRGPGRQAAVKMGDRVLARTEETQTGWIAYPMKVLASADESVMGVVEIDGSGKGWLAPVDKRIRHSPPIADLGGAEGGQLVLAEPAGRSPRAGVKVVQVLGDPLAPKAFSLIAIAKYGIPFHFANETLEEAKLAAKLPLSEERREDLRHIPIVAIDPADARDHDDAIWAEPDGKGGFNAIVAIADVSFYVRPGGKLDREARKRGNSVYFPDRVVPMLPEILSADVCSLKEGQDRAAMACHLSIDASGNVKAWRFTRAIVRIASNIAYENAQAAIDDGSADDVLKNLWACWHALADARNKRDPLELELPERRVVLDEKGRIAEIAIRERLDAHRVVEDFMIAANVAAAKALESKAHPVVYRIHEPPSREKLVALREYLQTFEKKLSLGQVITPGLFNRMLKDVADESEKALIMEAVLRSQTQAYYGPRNAGHFGLALGSYAHFTSPIRRYADLLVHRALVDAFGLEQPKPKDDLPETSGLSDRDRADLERVSEAISSAERRAMEAERETSDRYVAAWLSGRVGEVFDTRITGVQKFGFFATIIALGGDGLVPVSTLGNDYYHYDDSAQALVGERTRTIYAMGDRLKLRLAEANPLTGALKFELPEGGSAPIEPRGSKMEPRKKGKHIVGKRGRPGNIRHQGKKR*