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scnpilot_p_inoc_scaffold_136_curated

Search features with annotation key words

Displaying items 1-30 of 242 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_136_curated_1
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1031)
DNA (1029bp) protein (343aa)
Family 3 adenylate cyclase n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0B958_9XANT
Adenylate cyclase {ECO:0000313|EMBL:GAN45070.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_136_curated_2
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1210..2070
DNA (861bp) protein (287aa)
pirin n=1 Tax=Dyella ginsengisoli RepID=UPI000349AD05
Uncharacterized protein {ECO:0000313|EMBL:KGI79192.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
pirin-related protein; K06911
scnpilot_p_inoc_scaffold_136_curated_3
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2136..2867)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QRD9_9BRAD
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:KIL98710.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
short-chain dehydrogenase/reductase SDR
scnpilot_p_inoc_scaffold_136_curated_4
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2864..4192)
DNA (1329bp) protein (443aa)
FAD/FMN-dependent dehydrogenase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QRD8_9BRAD
FAD/FMN-dependent dehydrogenase {ECO:0000313|EMBL:EIG62344.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
FAD linked oxidase domain-containing protein
scnpilot_p_inoc_scaffold_136_curated_5
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4189..5982)
DNA (1794bp) protein (598aa)
potassium transporter n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B38D54
Potassium transporter {ECO:0000313|EMBL:GAN45934.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
potassium efflux system protein; K11747 glutathione-regulated potassium-efflux system protein KefB
scnpilot_p_inoc_scaffold_136_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6376..7860)
DNA (1485bp) protein (495aa)
Glutathione synthase/ribosomal protein S6 modification protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUD5_9GAMM
Glutathione synthase/ribosomal protein S6 modification protein {ECO:0000313|EMBL:EIL90826.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glutathione synthase/ribosomal protein S6 modification enzyme (glutaminyl transferase)
scnpilot_p_inoc_scaffold_136_curated_7
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8072..8560
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003785F30
GCN5 family acetyltransferase {ECO:0000313|EMBL:KGI79209.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
acetyltransferase
scnpilot_p_inoc_scaffold_136_curated_8
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8630..10069)
DNA (1440bp) protein (480aa)
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_p_inoc_scaffold_136_curated_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10154..10831)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUD3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90824.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_p_inoc_scaffold_136_curated_10
unknown

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10952..11083
DNA (132bp) protein (44aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_136_curated_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11097..11927
DNA (831bp) protein (277aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
diaminopimelate epimerase (EC:5.1.1.7)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003733A4A
scnpilot_p_inoc_scaffold_136_curated_12
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11920..12606
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003618620
Uncharacterized protein {ECO:0000313|EMBL:KGI79208.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein; K09921 hypothetical protein
scnpilot_p_inoc_scaffold_136_curated_13
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12608..13501
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036058B0
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
xerC; site-specific tyrosine recombinase XerC; K03733 integrase/recombinase XerC
scnpilot_p_inoc_scaffold_136_curated_14
unknown

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comp(13462..14187)
DNA (726bp) protein (242aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_136_curated_15
Alcanivorax sp. P2S70, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14405..14827)
DNA (423bp) protein (141aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=1397527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp. P2S70.;"
msrb; methionine sulfoxide reductase B (EC:1.8.4.11); K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Alcanivorax sp. P2S70 RepID=U7FM62_9GAMM
scnpilot_p_inoc_scaffold_136_curated_16
Marinobacter nanhaiticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14824..15465)
DNA (642bp) protein (214aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=626887 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter nanhaiticus D15-8W.;"
methionine sulfoxide reductase A; K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6W757_9ALTE
scnpilot_p_inoc_scaffold_136_curated_17
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15611..16723
DNA (1113bp) protein (371aa)
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Alcohol dehydrogenase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPI0_9GAMM
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
scnpilot_p_inoc_scaffold_136_curated_18
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16812..17762
DNA (951bp) protein (317aa)
transmembrane sodium/calcium exchanger protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003755EF4
yrbG; putative transmembrane sodium/calcium exchanger protein; K07301 inner membrane protein
Transmembrane sodium/calcium exchanger protein {ECO:0000313|EMBL:EQM83845.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
scnpilot_p_inoc_scaffold_136_curated_19
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17808..18842
DNA (1035bp) protein (345aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=443143 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
Multi-sensor signal transduction histidine kinase n=1 Tax=Geobacter sp. (strain M18) RepID=E8WMT5_GEOS8
multi-sensor signal transduction histidine kinase
scnpilot_p_inoc_scaffold_136_curated_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18868..19743
DNA (876bp) protein (292aa)
Nucleoside-diphosphate-sugar epimerase n=2 Tax=Rhodanobacter denitrificans RepID=M4NKM1_9GAMM
nucleoside-diphosphate-sugar epimerase
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:AGG90238.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_p_inoc_scaffold_136_curated_21
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19889..22051
DNA (2163bp) protein (721aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003635A36
hypothetical protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_p_inoc_scaffold_136_curated_22
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22075..23976
DNA (1902bp) protein (634aa)
Putative uncharacterized protein id=2651952 bin=GWF1_Xanthomonadales_69_6 species=Colwellia psychrerythraea genus=Colwellia taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_p_inoc_scaffold_136_curated_23
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23988..25373
DNA (1386bp) protein (462aa)
Putative uncharacterized protein id=2651951 bin=GWF1_Xanthomonadales_69_6 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
Tax=GWF1_Xanthomonadales_69_6_curated
scnpilot_p_inoc_scaffold_136_curated_24
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25470..26615
DNA (1146bp) protein (382aa)
Glycosyl hydrolase, BNR repeat protein id=2651950 bin=GWF1_Xanthomonadales_69_6 species=Alteromonas sp. genus=Alteromonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
BNR repeat-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_p_inoc_scaffold_136_curated_25
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26626..29133
DNA (2508bp) protein (836aa)
RND transporter n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B6BEDD
hypothetical protein; K07003
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_p_inoc_scaffold_136_curated_26
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29197..29895)
DNA (699bp) protein (233aa)
Putative uncharacterized protein n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E5N3_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EGV28604.1}; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus drewsii AZ1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_136_curated_27
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29940..30404)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003759F72
Membrane protein {ECO:0000313|EMBL:GAN45431.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_136_curated_28
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30462..31358)
DNA (897bp) protein (299aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRS6_9GAMM
phosphoribosylaminoimidazole-succinocarboxamide synthase
scnpilot_p_inoc_scaffold_136_curated_29
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31638..32435
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000366008C
Molecular chaperone DnaJ {ECO:0000313|EMBL:GAN45427.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
protein with DnaJ-like domain; K05801 DnaJ like chaperone protein
scnpilot_p_inoc_scaffold_136_curated_30
unknown

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comp(32399..32656)
DNA (258bp) protein (86aa)

This feature has no annotations

Displaying items 1-30 of 242 in total

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