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scnpilot_p_inoc_scaffold_137_curated

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Displaying items 1-30 of 282 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_137_curated_1
unknown

Not on your lists

comp(764..1351)
DNA (588bp) protein (196aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_137_curated_2
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1348..2403)
DNA (1056bp) protein (352aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta n=1 Tax=mine drainage metagenome RepID=T0YFS0_9ZZZZ
putative 2-oxoacid:acceptor oxidoreductase, beta subunit
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_p_inoc_scaffold_137_curated_3
unknown

Not on your lists

comp(2476..2712)
DNA (237bp) protein (79aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_137_curated_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2709..4553)
DNA (1845bp) protein (615aa)
ferredoxin oxidoreductase n=1 Tax=Rudaea cellulosilytica RepID=UPI00036C88DB
putative 2-oxoacid:acceptor oxidoreductase, alpha subunit
Putative 2-oxoacid:acceptor oxidoreductase, alpha subunit {ECO:0000313|EMBL:AGU53159.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
scnpilot_p_inoc_scaffold_137_curated_5
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4738..6564)
DNA (1827bp) protein (609aa)
glutamate synthase (nadph) (EC:1.4.1.13)
glutamate synthase n=1 Tax=Rudaea cellulosilytica RepID=UPI00037D3496
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_p_inoc_scaffold_137_curated_6
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6828..8879
DNA (2052bp) protein (684aa)
acylaminoacyl peptidase (EC:3.4.21.-)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035EA7A6
Acyl-peptide hydrolase {ECO:0000313|EMBL:EYR65578.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
scnpilot_p_inoc_scaffold_137_curated_7
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8869..9576
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003793DC1
UPF0502 protein N789_12005 {ECO:0000256|HAMAP-Rule:MF_01584}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
mviM; Virulence factor mviM; K09915 hypothetical protein
scnpilot_p_inoc_scaffold_137_curated_8
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9573..10364
DNA (792bp) protein (264aa)
Putative uncharacterized protein id=3022196 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein; K09125 hypothetical protein
Tax=GWF1_Xanthomonadales_69_6_curated
scnpilot_p_inoc_scaffold_137_curated_9
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10399..11061)
DNA (663bp) protein (221aa)
Methyltransferase type 12 id=3023006 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
putative S-adenosyl-L-methionine-dependent methyltransferase
Tax=GWF1_Xanthomonadales_69_6_curated
scnpilot_p_inoc_scaffold_137_curated_10
Capnocytophaga sp. oral taxon 336, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11332..11877)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Capnocytophaga sp. oral taxon 336 str. F0502 RepID=S3BMP4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EPE00626.1}; TaxID=1203603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp. oral taxon 336 str. F0502.;"
M96 mating-specific protein, putative
scnpilot_p_inoc_scaffold_137_curated_11
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11953..14115)
DNA (2163bp) protein (721aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000380E9A9
Ribosomal RNA large subunit methyltransferase K/L {ECO:0000256|HAMAP-Rule:MF_01858, ECO:0000256|SAAS:SAAS00183812}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
putative N6-adenine-specific DNA methylase
scnpilot_p_inoc_scaffold_137_curated_12
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14115..14630)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035E287C
hypothetical protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_p_inoc_scaffold_137_curated_13
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14759..15334
DNA (576bp) protein (192aa)
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; K01447 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WUH4_PSEUU
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_p_inoc_scaffold_137_curated_14
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15388..16257
DNA (870bp) protein (290aa)
Acyl-CoA thioesterase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFS9_9GAMM
acyl-CoA thioesterase
Acyl-CoA thioesterase {ECO:0000313|EMBL:EYR67501.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
scnpilot_p_inoc_scaffold_137_curated_15
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16269..16655
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WM50_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM00542.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_p_inoc_scaffold_137_curated_16
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16737..17453
DNA (717bp) protein (239aa)
Putative arginyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194293}; Short=Arginyltransferase {ECO:0000256|HAMAP-Rule:MF_00689};; Short=R-transferase {ECO:0000256|HAMAP-Rule:MF_00689};; EC=2.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194290};; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
putative arginyl-tRNA:protein arginylyltransferase; K00685 arginine-tRNA-protein transferase [EC:2.3.2.8]
arginyl-tRNA--protein transferase n=1 Tax=Dyella japonica RepID=UPI00030F393A
scnpilot_p_inoc_scaffold_137_curated_17
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17458..19032
DNA (1575bp) protein (525aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037A7A08
Uncharacterized protein {ECO:0000313|EMBL:AIF48732.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein
scnpilot_p_inoc_scaffold_137_curated_18
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19029..19970
DNA (942bp) protein (314aa)
Integral membrane protein n=2 Tax=mine drainage metagenome RepID=T1AK42_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KFN49739.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
hypothetical protein
scnpilot_p_inoc_scaffold_137_curated_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20252..21136
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3U5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94136.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
membrane protease subunit, stomatin/prohibitin
scnpilot_p_inoc_scaffold_137_curated_20
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21170..21379
DNA (210bp) protein (70aa)
Uncharacterized protein n=3 Tax=Xanthomonas campestris pv. translucens RepID=K8Z547_XANCT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFN44767.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
scnpilot_p_inoc_scaffold_137_curated_21
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21484..22857
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VQS2_9GAMM
dienelactone hydrolase-related enzyme
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_p_inoc_scaffold_137_curated_22

Not on your lists

22886..23443
DNA (558bp) protein (186aa)
Peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins domain protein {ECO:0000313|EMBL:EQD76728.1}; EC=3.4.16.4 {ECO:0000313|EMBL:EQD76728.1};; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003668525
peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
scnpilot_p_inoc_scaffold_137_curated_23
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23643..24713
DNA (1071bp) protein (357aa)
extracellular protease (EC:3.4.24.-)
Extracellular protease {ECO:0000313|EMBL:AEK63262.1}; EC=3.4.24.- {ECO:0000313|EMBL:AEK63262.1};; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
Extracellular protease n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AD78_COLFT
scnpilot_p_inoc_scaffold_137_curated_24
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24784..27657)
DNA (2874bp) protein (958aa)
peptidase S45 penicillin amidase; K01434 penicillin amidase [EC:3.5.1.11]
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036259CD
Peptidase S45 penicillin amidase {ECO:0000313|EMBL:ACL67355.1}; Flags: Precursor;; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258).;"
scnpilot_p_inoc_scaffold_137_curated_25
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27815..28207)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036A27FA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADC71405.1}; Flags: Precursor;; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sp. (strain K90mix).;"
scnpilot_p_inoc_scaffold_137_curated_26
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28467..29690)
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000379FA3A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAU92169.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
scnpilot_p_inoc_scaffold_137_curated_27
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29705..31564)
DNA (1860bp) protein (620aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037AFDF9
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAU92170.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
scnpilot_p_inoc_scaffold_137_curated_28
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31577..32311)
DNA (735bp) protein (245aa)
ABC transporter permease n=1 Tax=Rudaea cellulosilytica RepID=UPI000361B6CE
ABC transporter permease; K01992 ABC-2 type transport system permease protein rbh
Putative ABC transporter, permease protein {ECO:0000313|EMBL:AAU92171.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
scnpilot_p_inoc_scaffold_137_curated_29
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32308..33246)
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI000360AB6A
ABC transporter ATP-binding protein; K09687 antibiotic transport system ATP-binding protein rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AAU92172.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
scnpilot_p_inoc_scaffold_137_curated_30
unknown

Not on your lists

comp(33762..34358)
DNA (597bp) protein (199aa)

This feature has no annotations

Displaying items 1-30 of 282 in total

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