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scnpilot_p_inoc_scaffold_404_curated

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_404_curated_1
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105..644)
DNA (540bp) protein (180aa)
Carbohydrate binding protein, putative, cbp35A n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PEP0_CELJU
cbp35A; carbohydrate binding protein
Carbohydrate binding protein, putative, cbp35A {ECO:0000313|EMBL:ACE85711.1}; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp.; cellulosa).;"
scnpilot_p_inoc_scaffold_404_curated_2
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(1248..4172)
DNA (2925bp) protein (975aa)
Lysyl endopeptidase {ECO:0000313|EMBL:ABX03140.1}; EC=3.4.21.50 {ECO:0000313|EMBL:ABX03140.1};; Flags: Precursor;; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
Lysyl endopeptidase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AV62_HERA2
lysyl endopeptidase
scnpilot_p_inoc_scaffold_404_curated_3
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4542..6752)
DNA (2211bp) protein (737aa)
TonB-dependent receptor n=1 Tax=mine drainage metagenome RepID=T1B0V5_9ZZZZ
TonB-denpendent receptor {ECO:0000313|EMBL:GAN45704.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
outer membrane receptor protein
scnpilot_p_inoc_scaffold_404_curated_4
unknown

Not on your lists

comp(6859..7041)
DNA (183bp) protein (61aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_404_curated_5
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7248..8285)
DNA (1038bp) protein (346aa)
Twitching motility protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUT4_9GAMM
Twitching motility protein PilT {ECO:0000313|EMBL:GAN45295.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
pilus retraction ATPase PilT
scnpilot_p_inoc_scaffold_404_curated_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8532..9374
DNA (843bp) protein (281aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Pyrroline-5-carboxylate reductase n=1 Tax=Rhodanobacter denitrificans RepID=M4NBI4_9GAMM
pyrroline-5-carboxylate reductase
scnpilot_p_inoc_scaffold_404_curated_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9386..9964
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZK4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92645.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
YGGT family protein
scnpilot_p_inoc_scaffold_404_curated_8
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10019..10462
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037AE73C
Uncharacterized protein {ECO:0000313|EMBL:GAN45296.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_404_curated_9
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10492..11313)
DNA (822bp) protein (274aa)
ABC transporter substrate-binding protein n=1 Tax=Dyella ginsengisoli RepID=UPI000346BB51
ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAN45297.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
ABC-type Fe3+-hydroxamate transport system, periplasmic component
scnpilot_p_inoc_scaffold_404_curated_10
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11313..11927)
DNA (615bp) protein (205aa)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
Pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036CFAA1
scnpilot_p_inoc_scaffold_404_curated_11
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11971..13533)
DNA (1563bp) protein (521aa)
histidine kinase (EC:2.7.3.-)
Signal transduction histidine kinase n=1 Tax=Beggiatoa alba B18LD RepID=I3CBH6_9GAMM
Signal transduction histidine kinase {ECO:0000313|EMBL:EIJ40969.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
scnpilot_p_inoc_scaffold_404_curated_12
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

Not on your lists

comp(13530..14030)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI000374A941
hypothetical protein; K06883
Tax=GWD1_Spirochaetes_27_9_curated
scnpilot_p_inoc_scaffold_404_curated_13
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14027..15793)
DNA (1767bp) protein (589aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4L535_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESQ12273.1}; TaxID=1385625 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source="uncultured Thiohalocapsa sp. PB-PSB1.;"
outer membrane protein/peptidoglycan-associated (lipo)protein
scnpilot_p_inoc_scaffold_404_curated_14
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(15816..16466)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI000378188E
Uncharacterized protein {ECO:0000313|EMBL:KJH69748.1}; TaxID=1618023 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CENA595.;"
hypothetical protein
scnpilot_p_inoc_scaffold_404_curated_15
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16516..17214)
DNA (699bp) protein (233aa)
Two component transcriptional regulator, winged helix family n=1 Tax=mine drainage metagenome RepID=T1B525_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:GAN45926.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
winged helix family two component transcriptional regulator
scnpilot_p_inoc_scaffold_404_curated_16
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17430..17633)
DNA (204bp) protein (68aa)
Uncharacterized protein n=8 Tax=Stenotrophomonas maltophilia RepID=B2FQI6_STRMK
hypothetical protein; K09165 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH13706.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
scnpilot_p_inoc_scaffold_404_curated_17
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17701..18207)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000379BB97
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
scnpilot_p_inoc_scaffold_404_curated_18
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18480..19040
DNA (561bp) protein (187aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
shikimate kinase; K00891 shikimate kinase [EC:2.7.1.71]
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000365E5C1
scnpilot_p_inoc_scaffold_404_curated_19
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19027..20100
DNA (1074bp) protein (358aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZL3_9GAMM
scnpilot_p_inoc_scaffold_404_curated_20
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20181..20441
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003751EB0
Uncharacterized protein {ECO:0000313|EMBL:GAN45301.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_404_curated_21
unknown

Not on your lists

21049..21345
DNA (297bp) protein (99aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_404_curated_22
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21362..22408
DNA (1047bp) protein (349aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase HemE (Fragment) n=2 Tax=mine drainage metagenome RepID=T0Y7E4_9ZZZZ
scnpilot_p_inoc_scaffold_404_curated_23
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22418..23422
DNA (1005bp) protein (335aa)
GumN protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B77CA5
GumN protein {ECO:0000313|EMBL:EYR70345.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
GumN protein
scnpilot_p_inoc_scaffold_404_curated_24
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23488..27123)
DNA (3636bp) protein (1212aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003707645
Uncharacterized protein {ECO:0000313|EMBL:KGI78727.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
signal transduction histidine kinase
scnpilot_p_inoc_scaffold_404_curated_25
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27213..28721
DNA (1509bp) protein (503aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035DC623
Uncharacterized protein {ECO:0000313|EMBL:EIL91740.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
GTPase of unknown function
scnpilot_p_inoc_scaffold_404_curated_26
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28793..29422
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000379E902
Uncharacterized protein {ECO:0000313|EMBL:KFN45605.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_404_curated_27
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29403..29978
DNA (576bp) protein (192aa)
Cytochrome B561 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPV3_9GAMM
Cytochrome B561 {ECO:0000313|EMBL:EIM01495.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
cytochrome B561
scnpilot_p_inoc_scaffold_404_curated_28
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29975..30523
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W157_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93198.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_p_inoc_scaffold_404_curated_29
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30538..31911
DNA (1374bp) protein (458aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036E846F
protein of unknown function (DUF697)/GTPase of unknown function
Uncharacterized protein {ECO:0000313|EMBL:AGG87813.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_p_inoc_scaffold_404_curated_30
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31937..32206)
DNA (270bp) protein (90aa)
glutaredoxin n=1 Tax=Dyella ginsengisoli RepID=UPI00034AD05E
Glutaredoxin-like domain (DUF836)
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
Displaying items 1-30 of 77 in total

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