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scnpilot_p_inoc_scaffold_136_curated_33

Organism: scnpilot_dereplicated_Xanthomonadales_3

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(33485..34201)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Rhodanobacter sp. 115 RepID=I4WWC3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 225.0
  • Bit_score: 260
  • Evalue 1.60e-66
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.5
  • Coverage: 228.0
  • Bit_score: 275
  • Evalue 8.90e-71
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 230.0
  • Bit_score: 257
  • Evalue 5.70e-66

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Taxonomy

Lysobacter daejeonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 717
ATGCACCCATCCAACCTGGCAACCGAATTCTCGAAACTGACCGACGCCGAACTGGTCGAGCAGGTCCTGCATGGACAGGTGCAGGCCTTCCGGCATCTCATGCAACGCAGCAACCAGCGCCTCTTCCGCATGGCCCGAGGCGTGCTGGACGATGACAGCGAGGCCGAGGACGTGGTGCAGGAATCCTGGCTGCATGTCTATGCGCGACTGGACACCTTTCGCGGGGAATCCAGCGTGCTGACGTGGATGACCCGCATCGTCCTCAACGAGGCGCATGGCCGCCTGCGCGCACGCCGGCCGACGACCGACATCGAGAAACTGGACCTTGCCGCGAGCGGGAGTGCGCGGGTGATTCCGTTTCCGGGCAGGTTCGGCGCCGAGAATCCAGCGGCCTCGGCGAGCCGCGCGCAGATACGGCAGTTGCTGGAACTCGCCGTGGCCAGCCTGCCGGAGCCGTTTCGGCTGGTCTTCATCCTGCGTGAGATCGAGGAATGCAGCACGGAGGAAACTGCGCAGGCGCTTGGCATCCGCCAGGAAACCGTGAAGACGCGCTTGCATCGCGCGCGCAAGCTGCTGCGCGTCACCCTGCAGGACACCGTGAGCACGACGCTCGGCGAAACGTTCCCGTTCCTCGGTGCGCGCTGCGCGCGCATGACTGATACGGTGATGGACGCATTGACGGCAGCGGCATCACCGGCGCGCGACAGCGGCAACTGA
PROTEIN sequence
Length: 239
MHPSNLATEFSKLTDAELVEQVLHGQVQAFRHLMQRSNQRLFRMARGVLDDDSEAEDVVQESWLHVYARLDTFRGESSVLTWMTRIVLNEAHGRLRARRPTTDIEKLDLAASGSARVIPFPGRFGAENPAASASRAQIRQLLELAVASLPEPFRLVFILREIEECSTEETAQALGIRQETVKTRLHRARKLLRVTLQDTVSTTLGETFPFLGARCARMTDTVMDALTAAASPARDSGN*