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SCNpilot_BF_INOC_scaffold_10480

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_10480_1
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3..731
DNA (729bp) protein (243aa)
Glycoside hydrolase family 30 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PNN6_CHIPD
glycoside hydrolase
Glycoside hydrolase family 30 {ECO:0000313|EMBL:ACU64136.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" s
SCNpilot_BF_INOC_scaffold_10480_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(742..1293)
DNA (552bp) protein (184aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales;
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003631403
integral membrane sensor signal transduction histidine kinase
SCNpilot_BF_INOC_scaffold_10480_3
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(1268..1864)
DNA (597bp) protein (199aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003631403
integral membrane sensor signal transduction histidine kinase
SCNpilot_BF_INOC_scaffold_10480_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2044..3375)
DNA (1332bp) protein (444aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKC7_NIAKG
two component, sigma54 specific, transcriptional regulator, Fis family
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:AEV97583.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagac
SCNpilot_BF_INOC_scaffold_10480_5
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3730..4665
DNA (936bp) protein (312aa)
transporter n=1 Tax=Segetibacter koreensis RepID=UPI000381D427
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EHQ26289.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;"
transporter
Displaying 5 items

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