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SCNpilot_BF_INOC_scaffold_1146

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1146_1
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21..389)
DNA (369bp) protein (123aa)
Integrating conjugative element membrane protein n=5 Tax=Pseudomonas aeruginosa RepID=U8BTS2_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:CEI17405.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginos
conjugal transfer protein
SCNpilot_BF_INOC_scaffold_1146_2
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(412..651)
DNA (240bp) protein (80aa)
Integrating conjugative element protein n=8 Tax=Pseudomonas aeruginosa RepID=N2CRJ9_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:KIN90523.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1146_3
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(648..1019)
DNA (372bp) protein (124aa)
Putative transmembrane protein n=3 Tax=Pseudomonas stutzeri RepID=I4CR07_PSEST
putative transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:EPL61012.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona
SCNpilot_BF_INOC_scaffold_1146_4
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1118..1270
DNA (153bp) protein (51aa)
hypothetical protein; K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
hypothetical protein n=1 Tax=Proteobacteria RepID=UPI0003115DC3
hypothetical protein
SCNpilot_BF_INOC_scaffold_1146_5
Pseudomonas sp. M1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1433..1648
DNA (216bp) protein (72aa)
Putative helicase n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HZE3_PSEUO
DNA-binding protein {ECO:0000313|EMBL:ETM65997.1}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain
phage transcriptional regulator AlpA
SCNpilot_BF_INOC_scaffold_1146_6
Desulfovibrio alkalitolerans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1972..4155
DNA (2184bp) protein (728aa)
Type I restriction-modification system, M subunit n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7TD26_9DELT
Type I restriction-modification system, M subunit {ECO:0000313|EMBL:EPR34561.1}; TaxID=1121439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfov
type I restriction-modification system, M subunit
SCNpilot_BF_INOC_scaffold_1146_7
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4161..4742
DNA (582bp) protein (194aa)
Restriction modification system DNA specificity domain-containing protein n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7UL17_9DELT
Restriction endonuclease {ECO:0000313|EMBL:AJY68393.1}; TaxID=35554 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurred
restriction modification system DNA specificity subunit
SCNpilot_BF_INOC_scaffold_1146_8
Desulfovibrio alkalitolerans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4739..7756
DNA (3018bp) protein (1006aa)
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7UQF6_9DELT
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:EPR34558.1}; TaxID=1121439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulf
HsdR family type I site-specific deoxyribonuclease
SCNpilot_BF_INOC_scaffold_1146_9
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7761..8204
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WMK6_VEREI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM58863.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobact
SCNpilot_BF_INOC_scaffold_1146_10
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8201..8962
DNA (762bp) protein (254aa)
Lj965 prophage protein n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WMK7_VEREI
Lj965 prophage protein
Lj965 prophage protein {ECO:0000313|EMBL:ABM58864.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacte
SCNpilot_BF_INOC_scaffold_1146_11
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9210..11045
DNA (1836bp) protein (612aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EBD7_BRASB
Uncharacterized protein {ECO:0000313|EMBL:ABQ33481.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
SCNpilot_BF_INOC_scaffold_1146_12
Roseovarius sp. TM1035, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11042..12400
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Mycobacterium canettii CIPT 140070008 RepID=L0Q4X1_9MYCO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDM33296.1}; TaxID=391613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. TM
SCNpilot_BF_INOC_scaffold_1146_13
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12535..13284)
DNA (750bp) protein (250aa)
Putative membrane protein n=1 Tax=Bordetella parapertussis (strain Bpp5) RepID=K0MDN7_BORPB
membrane protein
Putative membrane protein {ECO:0000313|EMBL:CCJ47872.1}; TaxID=1208660 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella parapert
SCNpilot_BF_INOC_scaffold_1146_14
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13281..15437)
DNA (2157bp) protein (719aa)
Conjugative coupling factor TraD, PFGI-1 class n=1 Tax=Pseudomonas aeruginosa BWHPSA011 RepID=U8V5J2_PSEAI
Conjugal transfer protein TraG {ECO:0000313|EMBL:AJW44637.1}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mann
conjugal transfer protein TraG
SCNpilot_BF_INOC_scaffold_1146_15
Pseudomonas balearica, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15446..15979)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA011 RepID=U8VCF8_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE16264.1}; TaxID=1123016 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas balea
SCNpilot_BF_INOC_scaffold_1146_16
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15976..16596)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA006 RepID=U8VCK6_PSEAI
lytic transglycosylase rbh
Lytic transglycosylase {ECO:0000313|EMBL:AJW44635.1}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilyt
SCNpilot_BF_INOC_scaffold_1146_17
Pseudomonas xanthomarina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16581..17300)
DNA (720bp) protein (240aa)
Integrating conjugative element protein n=1 Tax=Pseudomonas aeruginosa str. Stone 130 RepID=N2CNN2_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:CEG50951.1}; TaxID=271420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas xantho
hypothetical protein
SCNpilot_BF_INOC_scaffold_1146_18
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17310..17567)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Pseudomonas chloritidismutans AW-1 RepID=V4QHB3_PSECO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL06482.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri
SCNpilot_BF_INOC_scaffold_1146_19
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17592..17957)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Pseudomonas stutzeri RepID=UPI0003030DFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB84165.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source=
SCNpilot_BF_INOC_scaffold_1146_20
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17954..18523)
DNA (570bp) protein (190aa)
Integrating conjugative element protein PilL, PFGI-1 class n=7 Tax=Pseudomonas aeruginosa RepID=U8BRW1_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:CEI17365.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginos
secreted protein
SCNpilot_BF_INOC_scaffold_1146_21
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18722..19159)
DNA (438bp) protein (146aa)
Plasmid-like protein n=1 Tax=Pseudomonas putida CSV86 RepID=L1LYF1_PSEPU
Plasmid-like protein {ECO:0000313|EMBL:EKX84028.1}; TaxID=1005395 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida C
plasmid-like protein
Displaying 21 items

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