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SCNpilot_BF_INOC_scaffold_1212

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Displaying items 1-30 of 41 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1212_1
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..873
DNA (873bp) protein (291aa)
Type IV secretion protein VirB4 n=2 Tax=Oligotropha carboxidovorans RepID=B6JK43_OLICO
Bradyrhizobium elkanii strain UASWS1015 Contig132, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53813.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
virB4; type IV secretion protein VirB4
SCNpilot_BF_INOC_scaffold_1212_2
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

870..1766
DNA (897bp) protein (299aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK44_OLICO
Bradyrhizobium elkanii strain UASWS1015 Contig132, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53812.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
hypothetical protein
SCNpilot_BF_INOC_scaffold_1212_3
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1777..2214
DNA (438bp) protein (146aa)
Conjugal transfer protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK45_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08313.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
SCNpilot_BF_INOC_scaffold_1212_4
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2235..2465
DNA (231bp) protein (77aa)
Conjugal transfer protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFH0_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08313.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
SCNpilot_BF_INOC_scaffold_1212_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2485..2673
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFH1_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE65026.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Ni
SCNpilot_BF_INOC_scaffold_1212_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2670..2864
DNA (195bp) protein (65aa)
Putative lipoprotein n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JK47_OLICO
lipoprotein
Lipoprotein {ECO:0000313|EMBL:KIZ46693.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
SCNpilot_BF_INOC_scaffold_1212_7
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2872..4002
DNA (1131bp) protein (377aa)
TrbL/VirB6 plasmid conjugal transfer protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK48_OLICO
Bradyrhizobium elkanii strain UASWS1015 Contig146, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53311.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
virB6; type IV secretion protein VirB6
SCNpilot_BF_INOC_scaffold_1212_8
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3999..4715
DNA (717bp) protein (239aa)
Type IV secretion protein VirB8 n=2 Tax=Oligotropha carboxidovorans RepID=B6JK49_OLICO
virulence protein
Bradyrhizobium elkanii strain UASWS1015 Contig150, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53117.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
SCNpilot_BF_INOC_scaffold_1212_9
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4712..5515
DNA (804bp) protein (268aa)
P-type conjugative transfer protein VirB9 n=2 Tax=Oligotropha carboxidovorans RepID=B6JK50_OLICO
virB9; type IV secretion protein VirB9
Type IV secretion protein VirB9 {ECO:0000313|EMBL:AEI08310.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha c
SCNpilot_BF_INOC_scaffold_1212_10
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5518..6870
DNA (1353bp) protein (451aa)
Conjugal transfer protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK51_OLICO
virB10; type IV secretion protein VirB10
Type IV secretion protein VirB10 {ECO:0000313|EMBL:AEI08309.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha
SCNpilot_BF_INOC_scaffold_1212_11
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6833..7906
DNA (1074bp) protein (358aa)
Type II secretion system protein E n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFH6_NITHX
Bradyrhizobium elkanii strain UASWS1015 Contig146, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53308.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
type II secretion system protein E
SCNpilot_BF_INOC_scaffold_1212_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7884..10034
DNA (2151bp) protein (717aa)
TRAG protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFH7_NITHX
TRAG protein
TRAG protein {ECO:0000313|EMBL:ABE65020.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter h
SCNpilot_BF_INOC_scaffold_1212_13
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10212..10541
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI0003667265
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidis
phosphate ABC transporter substrate-binding protein
SCNpilot_BF_INOC_scaffold_1212_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10985..11314)
DNA (330bp) protein (110aa)
membrane protein n=1 Tax=Afipia birgiae RepID=UPI000313EF84
Membrane protein {ECO:0000313|EMBL:KIZ48012.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustri
hypothetical protein
SCNpilot_BF_INOC_scaffold_1212_15
unknown

Not on your lists

11368..11535
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1212_16
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11455..12408)
DNA (954bp) protein (318aa)
Putative regulator putative molybdate and DNA-binding domains, excisionase family protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CFA3_METED
regulator; molybdate and DNA-binding domains, excisionase family protein
Putative regulator putative molybdate and DNA-binding domains, excisionase family protein {ECO:0000313|EMBL:CAX24301.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiale
SCNpilot_BF_INOC_scaffold_1212_17
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12635..13465
DNA (831bp) protein (277aa)
ABC transporter, periplasmic protein molybdate transporter n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CFA2_METED
molybdate ABC transporter substrate-binding protein
ABC transporter, periplasmic protein molybdate transporter {ECO:0000313|EMBL:CAX24300.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylo
SCNpilot_BF_INOC_scaffold_1212_18
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13481..14149
DNA (669bp) protein (223aa)
ABC transporter, permease molybdate transporter n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CFA1_METED
modB; molybdate ABC transporter permease
ABC transporter, permease molybdate transporter {ECO:0000313|EMBL:CAX24299.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;
SCNpilot_BF_INOC_scaffold_1212_19
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14142..14870
DNA (729bp) protein (243aa)
ABC transporter, ATPase molybdate transporter n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CFA0_METED
modC; molybdate ABC transporter ATPase
ABC transporter, ATPase molybdate transporter {ECO:0000313|EMBL:CAX24298.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;"
SCNpilot_BF_INOC_scaffold_1212_20
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14870..15691
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CF99_METED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAX24297.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
SCNpilot_BF_INOC_scaffold_1212_21
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15701..16504
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CF98_METED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAX24296.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
SCNpilot_BF_INOC_scaffold_1212_22
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17029..17592)
DNA (564bp) protein (188aa)
Transposase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C7T4_9SPHN
Transposase {ECO:0000313|EMBL:EIZ79500.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2
transposase
SCNpilot_BF_INOC_scaffold_1212_23
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17918..18256
DNA (339bp) protein (113aa)
Transposase and inactivated derivatives-like protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FUB1_ACICJ
transposase
Transposase {ECO:0000313|EMBL:KDM67725.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
SCNpilot_BF_INOC_scaffold_1212_24
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18310..18816
DNA (507bp) protein (169aa)
Transposase and inactivated derivatives-like protein n=2 Tax=Sphingomonas aromaticivorans RepID=A4XE74_NOVAD
transposase
Transposase and inactivated derivatives-like protein {ECO:0000313|EMBL:ABP64235.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphing
SCNpilot_BF_INOC_scaffold_1212_25
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18986..20173)
DNA (1188bp) protein (396aa)
Arabinose efflux permease family protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QSX5_9BRAD
Arabinose efflux permease family protein {ECO:0000313|EMBL:EIG62881.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhi
major facilitator transporter
SCNpilot_BF_INOC_scaffold_1212_26
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20170..21555)
DNA (1386bp) protein (462aa)
Putative flavoprotein involved in K+ transport n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QSX4_9BRAD
Putative flavoprotein involved in K+ transport {ECO:0000313|EMBL:EIG62880.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Br
hypothetical protein
SCNpilot_BF_INOC_scaffold_1212_27
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21605..21928)
DNA (324bp) protein (108aa)
Putative transcriptional regulator n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QSX3_9BRAD
Putative transcriptional regulator {ECO:0000313|EMBL:EIG62879.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrh
transcriptional regulator
SCNpilot_BF_INOC_scaffold_1212_28
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22125..22493
DNA (369bp) protein (123aa)
Transcriptional regulator, ArsR family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCZ0_PELHB
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:AEQ52773.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="P
SCNpilot_BF_INOC_scaffold_1212_29
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22571..22990
DNA (420bp) protein (140aa)
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; N
arsenate reductase n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00034CC11E
arsC; arsenate reductase
SCNpilot_BF_INOC_scaffold_1212_30
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23092..23847
DNA (756bp) protein (252aa)
NADPH-dependent FMN reductase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQ29_SPHAL
NADPH-dependent FMN reductase
NADPH-dependent FMN reductase {ECO:0000313|EMBL:ABF54243.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopy
Displaying items 1-30 of 41 in total

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