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SCNpilot_BF_INOC_scaffold_1216

Search features with annotation key words

Displaying items 1-30 of 62 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1216_1
Bdellovibrio sp. ArHS, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..741
DNA (741bp) protein (247aa)
Uncharacterized protein {ECO:0000313|EMBL:KHD87380.1}; TaxID=1569284 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio
SCNpilot_BF_INOC_scaffold_1216_2
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

750..1052
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DS46_DESVM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL08585.1}; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio
SCNpilot_BF_INOC_scaffold_1216_3
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1049..1651
DNA (603bp) protein (201aa)
Putative tail fiber assembly-like protein n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z2Z0_9NEIS
Putative tail fiber assembly-like protein {ECO:0000313|EMBL:EEG08943.1}; TaxID=279714 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" sou
hypothetical protein
SCNpilot_BF_INOC_scaffold_1216_4
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1645..1923
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DM47_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU64119.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira la
SCNpilot_BF_INOC_scaffold_1216_5
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1937..2164
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DMX2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO49586.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp.
SCNpilot_BF_INOC_scaffold_1216_6
unknown

Not on your lists

comp(2161..2535)
DNA (375bp) protein (125aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1216_7
Methylophilaceae bacterium 11, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2576..2986)
DNA (411bp) protein (137aa)
XRE family transcriptional regulator n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2G0P1_9GAMM
Putative transcription factor, MBF1 like protein {ECO:0000313|EMBL:EUJ11285.1}; TaxID=1101195 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methyl
SCNpilot_BF_INOC_scaffold_1216_8
Yersinia similis, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3022..3240
DNA (219bp) protein (73aa)
Phage transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2U1N6_9ENTR
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:AHK20724.1}; TaxID=367190 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia similis.;"
SCNpilot_BF_INOC_scaffold_1216_9
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3364..3828
DNA (465bp) protein (155aa)
Bacteriophage protein (Gp55-like) n=1 Tax=Acinetobacter sp. HA RepID=I4ZTH6_9GAMM
Tax=RBG_16_Betaproteobacteria_56_24_curated
SCNpilot_BF_INOC_scaffold_1216_10
unknown

Not on your lists

3828..4013
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1216_11
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4010..4237
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Janthinobacterium lividum RepID=UPI000288FFB0
putative uncharacterized domain protein
Putative uncharacterized domain protein {ECO:0000313|EMBL:CDG84141.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" sour
SCNpilot_BF_INOC_scaffold_1216_12
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4307..4984
DNA (678bp) protein (226aa)
Integrase family protein n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z4X5_9NEIS
site-specific recombinase XerC Tax=RBG_16_Betaproteobacteria_56_24_curated
site-specific recombinase XerC
SCNpilot_BF_INOC_scaffold_1216_13

Not on your lists

4981..5277
DNA (297bp) protein (99aa)
Gp27 n=2 Tax=unclassified phages RepID=E7EKZ1_9VIRU
Gp27 {ECO:0000313|EMBL:ADV36496.1}; TaxID=945084 species="Viruses; unclassified phages.;" source="Edwardsiella phage eiDWF.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1216_14
unknown

Not on your lists

5267..5560
DNA (294bp) protein (98aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1216_15
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5604..5921
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIQ0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62502.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira la
SCNpilot_BF_INOC_scaffold_1216_16
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6249..6497
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B4F31B
Uncharacterized protein {ECO:0000313|EMBL:EXL01435.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1216_17

Not on your lists

6494..6751
DNA (258bp) protein (86aa)
UPI0003CFAC15 related cluster n=1 Tax=unknown RepID=UPI0003CFAC15
Uncharacterized protein {ECO:0000313|EMBL:KKM73004.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1216_18
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6793..7269
DNA (477bp) protein (159aa)
Uncharacterized protein {ECO:0000313|EMBL:CAP41278.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (str
SCNpilot_BF_INOC_scaffold_1216_19
unknown

Not on your lists

7266..7577
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1216_20
unknown

Not on your lists

7574..7909
DNA (336bp) protein (112aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1216_21
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7919..8629
DNA (711bp) protein (237aa)
zinc finger CHC2-family protein n=2 Tax=pseudomallei group RepID=UPI00030249B4
CHC2 zinc finger family protein
CHC2-type zinc finger protein {ECO:0000313|EMBL:KFX27854.1}; TaxID=305 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanace
SCNpilot_BF_INOC_scaffold_1216_22
Burkholderia ubonensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8626..10587
DNA (1962bp) protein (654aa)
zinc finger CHC2-family protein n=1 Tax=Burkholderia ubonensis RepID=UPI00016A3FC1
toprim domain protein
Toprim domain protein {ECO:0000313|EMBL:AJX17313.1}; TaxID=1249668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia ubonen
SCNpilot_BF_INOC_scaffold_1216_23
unknown

Not on your lists

10587..10997
DNA (411bp) protein (137aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1216_24
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11089..11316
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X0T7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EON13117.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.
hypothetical protein
SCNpilot_BF_INOC_scaffold_1216_25
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11258..12178
DNA (921bp) protein (307aa)
Site-specific DNA methylase n=1 Tax=Pseudomonas fluorescens R124 RepID=K0X3Q6_PSEFL
Site-specific DNA methylase {ECO:0000313|EMBL:EJZ58510.1}; TaxID=743713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fl
DNA methyltransferase
SCNpilot_BF_INOC_scaffold_1216_26
RIFOXYB12_FULL_Gallionellales_54_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12171..13172
DNA (1002bp) protein (334aa)
Integrase family protein n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z4V9_9NEIS
site-specific recombinase XerD Tax=RIFOXYB12_FULL_Gallionellales_54_9_curated
site-specific recombinase XerD
SCNpilot_BF_INOC_scaffold_1216_27
RIFOXYB12_FULL_Gallionellales_54_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13409..13900
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXQ7_9BURK
hypothetical protein Tax=RIFOXYB12_FULL_Gallionellales_54_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1216_28
RIFOXYB12_FULL_Gallionellales_54_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13911..14315
DNA (405bp) protein (135aa)
Resolvase domain protein n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z4V7_9NEIS
resolvase domain-containing protein Tax=RIFOXYB12_FULL_Gallionellales_54_9_curated
resolvase domain-containing protein
SCNpilot_BF_INOC_scaffold_1216_29
RIFOXYB12_FULL_Gallionellales_54_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14407..15189
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z514_9NEIS
hypothetical protein Tax=RIFOXYB12_FULL_Gallionellales_54_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1216_30
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15186..16838
DNA (1653bp) protein (551aa)
Uncharacterized protein n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z513_9NEIS
Uncharacterized protein {ECO:0000313|EMBL:EEG08245.1}; TaxID=279714 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenk
hypothetical protein
Displaying items 1-30 of 62 in total

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