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SCNpilot_BF_INOC_scaffold_1219

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1219_1
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15..980)
DNA (966bp) protein (322aa)
Protein tyrosine phosphatase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IMD9_XANP2
protein tyrosine phosphatase
Protein tyrosine phosphatase {ECO:0000313|EMBL:ABS69182.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter aut
SCNpilot_BF_INOC_scaffold_1219_2
Ochrobactrum tritici, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1095..1430
DNA (336bp) protein (112aa)
ArsR1 n=1 Tax=Ochrobactrum tritici RepID=A1XP68_9RHIZ
ArsR1 {ECO:0000313|EMBL:ABF22608.1}; TaxID=94626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum tritici.;"
regulatory protein ArsR
SCNpilot_BF_INOC_scaffold_1219_3
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1442..2503
DNA (1062bp) protein (354aa)
Arsenical-resistance protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JAB3_OLICO
putative arsenite efflux pump protein
Putative arsenite efflux pump protein {ECO:0000313|EMBL:AEI05015.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotr
SCNpilot_BF_INOC_scaffold_1219_4
unknown

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2503..2703
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1219_5
unknown

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2820..3416
DNA (597bp) protein (199aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1219_6
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3542..4417
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00031FA124
phosphate/phosphonate ABC transporter
Uncharacterized protein {ECO:0000313|EMBL:ABS69170.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xa
SCNpilot_BF_INOC_scaffold_1219_7
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4422..5876
DNA (1455bp) protein (485aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Sta
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031227D3
integral membrane sensor signal transduction histidine kinase
SCNpilot_BF_INOC_scaffold_1219_8
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5866..7185
DNA (1320bp) protein (440aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DA86D9
two component sigma-54 specific Fis family transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ADH88603.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteracea
SCNpilot_BF_INOC_scaffold_1219_9
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7361..7882
DNA (522bp) protein (174aa)
arsenite oxidase small subunit n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00035CDD3B
arsenite oxidase small subunit
Arsenite oxidase small subunit {ECO:0000313|EMBL:ABS69173.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" sou
SCNpilot_BF_INOC_scaffold_1219_10
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7894..10398
DNA (2505bp) protein (835aa)
arsenite oxidase large subunit (EC:1.20.98.1)
Arsenite oxidase, large subunit {ECO:0000313|EMBL:ADH88601.1}; EC=1.20.9.1 {ECO:0000313|EMBL:ADH88601.1};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacte
arsenite oxidase large subunit n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F9BF7C
SCNpilot_BF_INOC_scaffold_1219_11
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10467..11753
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003172C87
Molybdopterin biosynthesis enzyme {ECO:0000313|EMBL:EIG62867.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhi
MoeA-like molybdopterin cofactor biosynthesis protein
SCNpilot_BF_INOC_scaffold_1219_12
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11777..12172
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E1747A
Cytochrome c2 {ECO:0000313|EMBL:EGP08397.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
cycA; cytochrome c550
SCNpilot_BF_INOC_scaffold_1219_13
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12289..13023
DNA (735bp) protein (245aa)
Transcriptional regulator, LuxR family n=3 Tax=Oligotropha carboxidovorans RepID=F8BQW8_OLICM
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEI08212.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligot
SCNpilot_BF_INOC_scaffold_1219_14
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13067..15004)
DNA (1938bp) protein (646aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NZS1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ETR79451.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1219_15
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15072..15329)
DNA (258bp) protein (86aa)
Uncharacterized protein {ECO:0000313|EMBL:ETR79451.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
SCNpilot_BF_INOC_scaffold_1219_16
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15326..15754)
DNA (429bp) protein (143aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=B6JK16_OLICO
Uncharacterized protein {ECO:0000313|EMBL:ETR79452.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1219_17
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16186..16887
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NRC6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32922.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
partitioning protein, ATPase
SCNpilot_BF_INOC_scaffold_1219_18
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16884..17312
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P3B9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ETR79454.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1219_19
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17355..18440)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NWQ1_9BRAD
Replication protein C {ECO:0000313|EMBL:ETR79455.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
replication protein C
SCNpilot_BF_INOC_scaffold_1219_20
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18876..19169
DNA (294bp) protein (98aa)
Helix-turn-helix domain protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BQW2_OLICM
Transcriptional regulator {ECO:0000313|EMBL:ETR79456.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
helix-turn-helix domain-containing protein
SCNpilot_BF_INOC_scaffold_1219_21
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19280..19651
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NUU2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32926.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
transcriptional regulator
SCNpilot_BF_INOC_scaffold_1219_22
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19700..19846)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NRD0_9BRAD
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
putative single-stranded DNA-binding protein
Displaying 22 items

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