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SCNpilot_BF_INOC_scaffold_1256

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1256_1
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

123..725
DNA (603bp) protein (201aa)
glyoxalase n=1 Tax=Acidovorax avenae RepID=UPI0002D272F1
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ADX47070.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" so
SCNpilot_BF_INOC_scaffold_1256_2
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

843..1910
DNA (1068bp) protein (356aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
Valine--tRNA ligase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MCB4_ACIET
Suspect SCG annotation. See neighboring gene [SCNpilot_BF_INOC_scaffold_1256_3].
valyl-tRNA synthetase
SCNpilot_BF_INOC_scaffold_1256_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1919..3679
DNA (1761bp) protein (587aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
Valine--tRNA ligase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MCB4_ACIET
valyl-tRNA synthetase
SCNpilot_BF_INOC_scaffold_1256_4
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3789..4673
DNA (885bp) protein (295aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=535289 s
UDP-glucose pyrophosphorylase n=2 Tax=Acidovorax RepID=A1W9W3_ACISJ
UTP-glucose-1-phosphate uridylyltransferase rbh
SCNpilot_BF_INOC_scaffold_1256_5
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4799..5854
DNA (1056bp) protein (352aa)
silent information regulator protein Sir2 n=1 Tax=Comamonas sp. B-9 RepID=UPI000395D8CC
silent information regulator protein Sir2 Tax=GWA2_Burkholderiales_64_37_curated
silent information regulator protein Sir2 rbh
SCNpilot_BF_INOC_scaffold_1256_6
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5851..6585
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Comamonas sp. B-9 RepID=UPI000395DC09
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABM41057.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain
SCNpilot_BF_INOC_scaffold_1256_7
unknown

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6572..6721
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1256_8
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6726..7769
DNA (1044bp) protein (348aa)
transcriptional factor n=1 Tax=Comamonas sp. B-9 RepID=UPI000395B689
hypothetical protein Tax=GWA2_Burkholderiales_64_37_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1256_9
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7732..8226
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=E1PTH4_GEOSK
hypothetical protein
Uncharacterized protein; TaxID=663917 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens (strain DL-1 / KN400).;"
SCNpilot_BF_INOC_scaffold_1256_10
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8555..8713)
DNA (159bp) protein (53aa)
SirA family protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4F5_ACIDE
SirA family protein {ECO:0000313|EMBL:EER60637.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN
sira family protein
SCNpilot_BF_INOC_scaffold_1256_11
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8824..9189)
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=T5KXG3_PSEAI
Cytochrome C {ECO:0000313|EMBL:KIL02623.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomona
hypothetical protein
SCNpilot_BF_INOC_scaffold_1256_12
Pseudomonas nitroreducens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9189..10646)
DNA (1458bp) protein (486aa)
Uncharacterized protein n=3 Tax=Pseudomonas aeruginosa RepID=U8C7W5_PSEAI
Amine oxidase {ECO:0000313|EMBL:AIE48222.1}; TaxID=46680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas nitroreducens.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1256_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10676..11170)
DNA (495bp) protein (165aa)
NAD-dependent aldehyde dehydrogenase; K00154 coniferyl-aldehyde dehydrogenase [EC:1.2.1.68] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037369E5
aldehyde dehydrogenase
SCNpilot_BF_INOC_scaffold_1256_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

11270..11653
DNA (384bp) protein (128aa)
Uncharacterized protein Tax=GWA2_Rokubacteria_70_23_curated
SCNpilot_BF_INOC_scaffold_1256_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12019..13668)
DNA (1650bp) protein (550aa)
long-chain-fatty-acid--CoA ligase (EC:2.3.1.86)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MLL1_9BURK
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:EIK90101.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogen
SCNpilot_BF_INOC_scaffold_1256_16
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13989..14906
DNA (918bp) protein (306aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ac
cysteine synthase n=1 Tax=Acidovorax avenae RepID=UPI00030633C3
cysM; cysteine synthase b
SCNpilot_BF_INOC_scaffold_1256_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14966..15529
DNA (564bp) protein (188aa)
NUDIX hydrolase id=12551029 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AFU47374.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_BF_INOC_scaffold_1256_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15535..15762
DNA (228bp) protein (76aa)
Sira family protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWR3_9BURK
sira family protein
Sira family protein {ECO:0000313|EMBL:AFU47373.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_BF_INOC_scaffold_1256_19
Pseudomonas sp. CMAA1215, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15964..17148)
DNA (1185bp) protein (395aa)
bktB; acetyl-CoA acetyltransferase (EC:2.3.1.9)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CMAA1215 RepID=U6ZX88_9PSED
Uncharacterized protein {ECO:0000313|EMBL:ERO63772.1}; TaxID=1387231 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. C
SCNpilot_BF_INOC_scaffold_1256_20
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17214..18800)
DNA (1587bp) protein (529aa)
Choline dehydrogenase n=1 Tax=Burkholderia multivorans (strain ATCC 17616 / 249) RepID=A9AKQ7_BURM1
choline dehydrogenase rbh
GMC oxidoreductase {ECO:0000313|EMBL:EJO56349.1}; TaxID=985078 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" s
SCNpilot_BF_INOC_scaffold_1256_21
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18824..19420)
DNA (597bp) protein (199aa)
Uncharacterized protein n=2 Tax=Burkholderia multivorans RepID=A9AKQ8_BURM1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJO56383.1}; TaxID=985078 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex
SCNpilot_BF_INOC_scaffold_1256_22
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19588..20952
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PVI0_9RHOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL25328.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
SCNpilot_BF_INOC_scaffold_1256_23
Pseudomonas resinovorans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20962..22785
DNA (1824bp) protein (608aa)
Uncharacterized protein n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AUR3_PSERE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN48071.1}; TaxID=1245471 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas resin
SCNpilot_BF_INOC_scaffold_1256_24
Pseudomonas resinovorans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22800..25160
DNA (2361bp) protein (787aa)
Uncharacterized protein n=3 Tax=Pseudomonas aeruginosa RepID=U8C5I1_PSEAI
Putative transporter {ECO:0000313|EMBL:BAN48072.1}; TaxID=1245471 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas resinovo
putative transporter
SCNpilot_BF_INOC_scaffold_1256_25
Pseudomonas resinovorans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25169..26104
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AQM1_PSERE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN48053.1}; TaxID=1245471 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas resin
SCNpilot_BF_INOC_scaffold_1256_26
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26115..27185
DNA (1071bp) protein (357aa)
AraC family transcriptional regulator n=1 Tax=Burkholderia multivorans (strain ATCC 17616 / 249) RepID=A9AKQ9_BURM1
AraC family transcriptional regulator rbh
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EJO56368.1}; TaxID=985078 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia ce
SCNpilot_BF_INOC_scaffold_1256_27
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27254..28165)
DNA (912bp) protein (304aa)
GCN5-related N-acetyltransferase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRN4_ALIDB
Gcn5-like N-acetyltransferase
Gcn5-like N-acetyltransferase {ECO:0000313|EMBL:GAO23037.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphi
SCNpilot_BF_INOC_scaffold_1256_28
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28557..29327
DNA (771bp) protein (257aa)
squalene synthase HpnD (EC:2.5.1.32)
phytoene synthase n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI0003727260
Phytoene/squalene synthetase {ECO:0000313|EMBL:GAD24823.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. M
SCNpilot_BF_INOC_scaffold_1256_29
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29956..30573
DNA (618bp) protein (206aa)
Squalene-associated FAD-dependent desaturase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MG06_ACIET
Amine oxidase {ECO:0000313|EMBL:GAO20779.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
squalene-associated fad-dependent desaturase
Displaying 29 items

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