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SCNpilot_BF_INOC_scaffold_1346

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Displaying items 1-30 of 51 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1346_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..200)
DNA (198bp) protein (66aa)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III subunits gamma and tau {ECO:0000313|EMBL:AFU45572.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AFU45572.1};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
DNA polymerase III subunits gamma and tau n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXF5_9BURK
SCNpilot_BF_INOC_scaffold_1346_2
unknown

Not on your lists

397..648
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1346_3
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(807..1079)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VTU4_POLNA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM39072.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthale
SCNpilot_BF_INOC_scaffold_1346_4
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1116..1409)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J1ECS4_9BURK
hypothetical protein; K09926 hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1346_5
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1415..2782)
DNA (1368bp) protein (456aa)
4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VTU6_POLNA
4Fe-4S ferredoxin Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
4Fe-4S ferredoxin
SCNpilot_BF_INOC_scaffold_1346_6
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2839..4284)
DNA (1446bp) protein (482aa)
Cbb3-type cytochrome c oxidase subunit n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VTU7_POLNA
cbb3-type cytochrome c oxidase subunit III
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromo
SCNpilot_BF_INOC_scaffold_1346_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4319..4459)
DNA (141bp) protein (47aa)
Cbb3-type cytochrome oxidase component n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNW1_9BURK
Cbb3-type cytochrome oxidase component {ECO:0000313|EMBL:EIK90901.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hyd
cbb3-type cytochrome oxidase subunit
SCNpilot_BF_INOC_scaffold_1346_8
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4480..4869)
DNA (390bp) protein (130aa)
peptidase S41 n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0002D96CCF
cbb3-type cytochrome c oxidase subunit II; K00405 cytochrome c oxidase cbb3-type subunit II Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
cbb3-type cytochrome c oxidase subunit II
SCNpilot_BF_INOC_scaffold_1346_9
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5086..6522)
DNA (1437bp) protein (479aa)
cbb3-type cytochrome c oxidase subunit I; K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1] Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
cytochrome oxidase subunit I n=1 Tax=Brachymonas chironomi RepID=UPI000364C1FC
cbb3-type cytochrome c oxidase subunit I
SCNpilot_BF_INOC_scaffold_1346_10
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6590..6727)
DNA (138bp) protein (46aa)
Cytochrome oxidase maturation protein, cbb3-type n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21X48_RHOFD
cbb3-type cytochrome oxidase maturation protein
Cytochrome oxidase maturation protein, cbb3-type {ECO:0000313|EMBL:ABD69655.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" sourc
SCNpilot_BF_INOC_scaffold_1346_11
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6727..9060)
DNA (2334bp) protein (778aa)
Heavy metal translocating P-type ATPase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VTV2_POLNA
FUPA27 P-type ATPase {ECO:0000313|EMBL:CDS53245.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.
heavy metal translocating P-type ATPase
SCNpilot_BF_INOC_scaffold_1346_12
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9212..9655
DNA (444bp) protein (148aa)
UspA n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21X51_RHOFD
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_BF_INOC_scaffold_1346_13
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9757..10365)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Methylotenera RepID=UPI00036EFA50
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1346_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10470..12044)
DNA (1575bp) protein (525aa)
Malonyl-CoA synthase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HV32_9BURK
malonyl-CoA synthase
Malonyl-CoA synthase {ECO:0000313|EMBL:AFU46813.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_BF_INOC_scaffold_1346_15
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12068..12862)
DNA (795bp) protein (265aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KWF4_9BURK
enoyl-CoA hydratase/isomerase Tax=GWA2_Curvibacter_64_110_curated
enoyl-CoA hydratase/isomerase
SCNpilot_BF_INOC_scaffold_1346_16
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12843..13829)
DNA (987bp) protein (329aa)
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CKK9_VARPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS19163.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Var
SCNpilot_BF_INOC_scaffold_1346_17
unknown

Not on your lists

comp(13915..14121)
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1346_18
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14183..15022)
DNA (840bp) protein (280aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=512030
Prolipoprotein diacylglyceryl transferase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C1J6_9BURK
lgt; prolipoprotein diacylglyceryl transferase
SCNpilot_BF_INOC_scaffold_1346_19
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15434..15649
DNA (216bp) protein (72aa)
bacterioferritin n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003675963
Bacterioferritin {ECO:0000256|RuleBase:RU000623}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
bacterioferritin
SCNpilot_BF_INOC_scaffold_1346_20
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15825..16550)
DNA (726bp) protein (242aa)
oxidoreductase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000363BACF
Dehydrogenase {ECO:0000313|EMBL:GAD21112.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
3-oxoacyl-[acyl-carrier protein] reductase
SCNpilot_BF_INOC_scaffold_1346_21
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16562..18418)
DNA (1857bp) protein (619aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MFA3_ACIET
SCNpilot_BF_INOC_scaffold_1346_22
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18906..20288
DNA (1383bp) protein (461aa)
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS
Dihydroxy-acid dehydratase n=2 Tax=Alicycliphilus denitrificans RepID=E8U062_ALIDB
SCNpilot_BF_INOC_scaffold_1346_23
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20399..20653)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T0J0_ACIDE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EER62008.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii
SCNpilot_BF_INOC_scaffold_1346_24
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20761..21072
DNA (312bp) protein (104aa)
cytochrome c-552 Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
cytochrome c-552 id=5083104 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
cytochrome c class i
SCNpilot_BF_INOC_scaffold_1346_25
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21183..23165)
DNA (1983bp) protein (661aa)
Acetyl-coenzyme A synthetase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T0J4_ACIDE
acetate--CoA ligase Tax=GWA2_Burkholderiales_64_37_curated
acetate--CoA ligase
SCNpilot_BF_INOC_scaffold_1346_26
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23459..24853)
DNA (1395bp) protein (465aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=887062 species="Bacteria; Prote
fumC; fumarate hydratase (EC:4.2.1.2)
Fumarate hydratase class II n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KSH2_9BURK
SCNpilot_BF_INOC_scaffold_1346_27
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24959..26515
DNA (1557bp) protein (519aa)
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U298_ALIDB
fe-s type, tartrate/fumarate subfamily hydro-lyase subunit alpha
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit {ECO:0000313|EMBL:ADU98902.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; A
SCNpilot_BF_INOC_scaffold_1346_28
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26592..27215)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T0K2_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER62020.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii
hypothetical protein
SCNpilot_BF_INOC_scaffold_1346_29
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27472..28674
DNA (1203bp) protein (401aa)
Phage integrase family protein n=7 Tax=Proteobacteria RepID=A1W957_ACISJ
integrase family protein
Integrase family protein {ECO:0000313|EMBL:AEB84011.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus de
SCNpilot_BF_INOC_scaffold_1346_30
Methylophaga frappieri, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28814..29164
DNA (351bp) protein (117aa)
Uncharacterized protein n=3 Tax=Gammaproteobacteria RepID=I1YGP4_METFJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ02087.1}; TaxID=754477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga fra
Displaying items 1-30 of 51 in total

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