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SCNpilot_BF_INOC_scaffold_1451

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1451_1
Gallionella capsiferriformans, Gallionella, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1799)
DNA (1797bp) protein (599aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:S
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SEG1_GALCS
5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase
SCNpilot_BF_INOC_scaffold_1451_2
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1909..2820
DNA (912bp) protein (304aa)
Transcriptional regulator MetR family n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GV43_CUPNN
bacterial regulatory helix-turn-helix, lysR family protein
Bacterial regulatory helix-turn-helix, lysR family protein {ECO:0000313|EMBL:AJZ62713.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkhol
SCNpilot_BF_INOC_scaffold_1451_3
unknown

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comp(3055..3177)
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1451_4
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3243..3512
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Methylomicrobium album BG8 RepID=H8GPC8_METAL
Uncharacterized protein {ECO:0000313|EMBL:EIC30874.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrob
hypothetical protein
SCNpilot_BF_INOC_scaffold_1451_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4194..4559)
DNA (366bp) protein (122aa)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_BF_INOC_scaffold_1451_6
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4556..5107)
DNA (552bp) protein (184aa)
pyridoxamine 5'-phosphate oxidase-like protein; K07006 id=12498072 bin=THIO_MID species=Acidithiobacillus ferrooxidans genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
pyridoxamine 5'-phosphate oxidase-like protein
Pyridoxamine 5'-phosphate oxidase-related FMN-binding {ECO:0000313|EMBL:ACH82472.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Aci
SCNpilot_BF_INOC_scaffold_1451_7
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5135..6043)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003477B17
putative permease, DMT superfamily
Putative permease, DMT superfamily {ECO:0000313|EMBL:AEV25765.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae
SCNpilot_BF_INOC_scaffold_1451_8
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6151..7044
DNA (894bp) protein (298aa)
LysR family transcriptional regulator n=1 Tax=Ideonella sp. B508-1 RepID=UPI000345C5A0
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AEV25766.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain
SCNpilot_BF_INOC_scaffold_1451_9

Not on your lists

7202..7591
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036227A6
Helper of transposition , insertion sequence of an IS21 family member {ECO:0000313|EMBL:CBI11257.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine d
IstB domain-containing protein ATP-binding protein
SCNpilot_BF_INOC_scaffold_1451_10
unknown

Not on your lists

comp(7513..7740)
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1451_11

Not on your lists

7847..8230
DNA (384bp) protein (128aa)
Putative acetyl-transferase n=1 Tax=uncultured bacterium RepID=E1U729_9BACT
Putative acetyl-transferase {ECO:0000313|EMBL:ACV97154.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1451_12
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8297..8890
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI000361531C
GCN5 family acetyltransferase {ECO:0000313|EMBL:GAO36654.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricell
acetyltransferase
SCNpilot_BF_INOC_scaffold_1451_13
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8909..9346
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Legionella shakespearei RepID=UPI00035C606F
Uncharacterized protein {ECO:0000313|EMBL:CEJ69094.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
hypothetical protein
SCNpilot_BF_INOC_scaffold_1451_14
Chlorobium ferrooxidans, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

9360..10145
DNA (786bp) protein (262aa)
isomerase n=1 Tax=Methylobacter marinus RepID=UPI00037BB5E5
Phenazine biosynthesis PhzC/PhzF protein {ECO:0000313|EMBL:EAT60005.1}; TaxID=377431 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" so
phenazine biosynthesis protein PhzF family
SCNpilot_BF_INOC_scaffold_1451_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10232..10846
DNA (615bp) protein (205aa)
FMN-binding negative transcriptional regulator n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ADD5_9PROT
FMN-binding negative transcriptional regulator Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
FMN-binding negative transcriptional regulator
SCNpilot_BF_INOC_scaffold_1451_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10841..11746)
DNA (906bp) protein (302aa)
Integral membrane protein, DUF6 n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHE8_THIDA
integral membrane protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
integral membrane protein
SCNpilot_BF_INOC_scaffold_1451_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12508..12972
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035DA056
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component,-related enzymes
Displaying 17 items

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