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SCNpilot_BF_INOC_scaffold_1468

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1468_1
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(143..721)
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BS51_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL24833.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp
SCNpilot_BF_INOC_scaffold_1468_2
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(735..1205)
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BS52_9BURK
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EHL24834.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp
SCNpilot_BF_INOC_scaffold_1468_3
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1229..1540)
DNA (312bp) protein (104aa)
Ribonucleotide-diphosphate reductase subunit alpha {ECO:0000313|EMBL:EHL24835.1}; EC=1.17.4.1 {ECO:0000313|EMBL:EHL24835.1};; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1)
Ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Acidovorax sp. NO-1 RepID=H0BS53_9BURK
SCNpilot_BF_INOC_scaffold_1468_4
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1803..4253
DNA (2451bp) protein (817aa)
Phage integrase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BS54_9BURK
Phage integrase {ECO:0000313|EMBL:EHL24836.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1468_5
unknown

Not on your lists

comp(4190..4354)
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1468_6
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4503..5282)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XBJ4_VARPD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1468_7
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5276..6265)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S800_9BURK
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1468_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6367..6651)
DNA (285bp) protein (95aa)
Phage transcriptional regulator, AlpA n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CKX6_VARPS
phage transcriptional regulator AlpA
Phage transcriptional regulator, AlpA {ECO:0000313|EMBL:ACS21127.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovor
SCNpilot_BF_INOC_scaffold_1468_9
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6712..6987)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EMA0_9BURK
(Protein belongs to CMGI-3) {ECO:0000313|EMBL:KJS06157.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1468_10
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6984..8273)
DNA (1290bp) protein (430aa)
Conjugation TrbI family protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV08_POLNA
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10 Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
conjugation TrbI family protein
SCNpilot_BF_INOC_scaffold_1468_11
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8276..9262)
DNA (987bp) protein (329aa)
Conjugal transfer protein TrbG/VirB9/CagX n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV07_POLNA
conjugal transfer protein TrbG/VirB9/CagX
Conjugal transfer protein TrbG/VirB9/CagX {ECO:0000313|EMBL:ABM39485.1}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polarom
SCNpilot_BF_INOC_scaffold_1468_12
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9259..9963)
DNA (705bp) protein (235aa)
Conjugal transfer protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV06_POLNA
conjugal transfer protein TrbF
Conjugal transfer protein {ECO:0000313|EMBL:ABM39484.1}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="
SCNpilot_BF_INOC_scaffold_1468_13
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9976..11355)
DNA (1380bp) protein (460aa)
TrbL/VirB6 plasmid conjugal transfer protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV05_POLNA
conjugal transfer protein TrbL
TrbL/VirB6 plasmid conjugal transfer protein {ECO:0000313|EMBL:ABM39483.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="
SCNpilot_BF_INOC_scaffold_1468_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11352..11660)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WC63_DELAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD37338.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
SCNpilot_BF_INOC_scaffold_1468_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11671..12399)
DNA (729bp) protein (243aa)
Conjugal transfer protein TrbJ n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKZ4_9BURK
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:EIK89884.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenoph
trbJ; P-type conjugative transfer protein TrbJ
SCNpilot_BF_INOC_scaffold_1468_16
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12396..13982)
DNA (1587bp) protein (529aa)
AAA ATPase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV03_POLNA
conjugal transfer ATPase TrbE; K03199 type IV secretion system protein VirB4 Tax=GWA2_Burkholderiales_64_37_curated
conjugal transfer ATPase TrbE
Displaying 16 items

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