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SCNpilot_BF_INOC_scaffold_14786

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_14786_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..674)
DNA (672bp) protein (224aa)
membrane protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI0003643319
Putative Zn-dependent hydrolase of beta-lactamase {ECO:0000313|EMBL:KFC73980.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="
beta-lactamase domain-containing protein
SCNpilot_BF_INOC_scaffold_14786_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(746..1150)
DNA (405bp) protein (135aa)
lysine transporter LysE n=1 Tax=Hoeflea sp. 108 RepID=UPI0003624795
Lysine exporter protein (LYSE/YGGA) {ECO:0000313|EMBL:KFC73978.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85
hypothetical protein
SCNpilot_BF_INOC_scaffold_14786_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1147..1338)
DNA (192bp) protein (64aa)
UPI0003CEDCCB related cluster n=1 Tax=unknown RepID=UPI0003CEDCCB
Lysine exporter protein (LYSE/YGGA) {ECO:0000313|EMBL:KFC73978.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85
lysine exporter protein LysE/YggA
SCNpilot_BF_INOC_scaffold_14786_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1396..1977)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J5PTG8_9RHOB
SCP-like extracellular protein {ECO:0000313|EMBL:KFC73976.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_14786_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2048..2467)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI00036C22E8
Uncharacterized protein {ECO:0000313|EMBL:KFC73977.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
conserved exported protein of unknown function
SCNpilot_BF_INOC_scaffold_14786_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2896..3501
DNA (606bp) protein (202aa)
Signal recognition particle protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHJ0_NITHX
signal recognition particle protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizob
SCNpilot_BF_INOC_scaffold_14786_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3837..4361
DNA (525bp) protein (175aa)
Signal recognition particle protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHJ0_NITHX
Suspect SCG annotation. See neighboring gene [SCNpilot_BF_INOC_scaffold_14786_6].
signal recognition particle protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizob
SCNpilot_BF_INOC_scaffold_14786_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4558..4890
DNA (333bp) protein (111aa)
30S ribosomal protein S16 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=RS16_NITHX
rpsP; 30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000255|HAMAP-Rule:MF_00385}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter ham
SCNpilot_BF_INOC_scaffold_14786_9
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4903..5241
DNA (339bp) protein (113aa)
Ribosome maturation factor RimM n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=RIMM_NITWN
rimM; 16S rRNA-processing protein RimM
Ribosome maturation factor RimM {ECO:0000255|HAMAP-Rule:MF_00014}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobact
Displaying 9 items

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