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SCNpilot_BF_INOC_scaffold_1613

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1613_1
unknown

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1..360
DNA (360bp) protein (120aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1613_2
unknown

Not on your lists

357..608
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1613_3
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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605..1033
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZLG6_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EPZ14342.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1613_4
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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1092..1505
DNA (414bp) protein (138aa)
Single-stranded DNA-binding protein n=1 Tax=Thauera terpenica 58Eu RepID=T0AUL0_9RHOO
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1348657 species="Bacteria; Proteobacteria; Bet
single-stranded DNA-binding protein
SCNpilot_BF_INOC_scaffold_1613_5

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1690..2859
DNA (1170bp) protein (390aa)
Transposase of ISCARN93, IS4 family IS4Sa group n=1 Tax=mine drainage metagenome RepID=E6QTD3_9ZZZZ
Transposase of ISCARN93, IS4 family IS4Sa group {ECO:0000313|EMBL:CBI10505.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
transposase IS4
SCNpilot_BF_INOC_scaffold_1613_6
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3042..3509
DNA (468bp) protein (156aa)
17 kDa surface antigen n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12C57_POLSJ
Glycine zipper 2TM domain containing protein {ECO:0000313|EMBL:KIF80986.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" sou
rickettsia 17 kDa surface antigen family protein
SCNpilot_BF_INOC_scaffold_1613_7

Not on your lists

3513..3734
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=U3LPN5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AGH89230.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_BF_INOC_scaffold_1613_8
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3889..4653
DNA (765bp) protein (255aa)
Plasmid replication protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZAN7_9RHOO
Plasmid replication protein {ECO:0000313|EMBL:EPZ14340.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu
plasmid replication protein
SCNpilot_BF_INOC_scaffold_1613_9
Xylella fastidiosa, Xylella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4650..5822
DNA (1173bp) protein (391aa)
Plasmid-partitioning protein ParB n=1 Tax=Xylella fastidiosa 6c RepID=V8K1Q8_XYLFS
plasmid replication/partition protein
Probable plasmid-partitioning protein ParB; TaxID=160492 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella.;" source="Xylella fastidiosa (strain 9a5c).
SCNpilot_BF_INOC_scaffold_1613_10
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6088..6462
DNA (375bp) protein (125aa)
transcriptional regulator n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002377B1C
Uncharacterized protein {ECO:0000313|EMBL:EPZ14337.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
transcriptional regulator
SCNpilot_BF_INOC_scaffold_1613_11
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6600..7544
DNA (945bp) protein (315aa)
TrfA family protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZAN2_9RHOO
TrfA family protein {ECO:0000313|EMBL:EPZ14335.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
TrfA family protein
SCNpilot_BF_INOC_scaffold_1613_12

Not on your lists

comp(8452..8859)
DNA (408bp) protein (136aa)
Regulator with HTH domain protein n=1 Tax=mine drainage metagenome RepID=T0Y8J9_9ZZZZ
Regulator with HTH domain protein {ECO:0000313|EMBL:EQD29473.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
XRE family transcriptional regulator
SCNpilot_BF_INOC_scaffold_1613_13
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8856..9140)
DNA (285bp) protein (95aa)
hypothetical protein Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
hypothetical protein id=12495571 bin=THIO_HI species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
SCNpilot_BF_INOC_scaffold_1613_14
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9290..10294
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZIA4_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EPZ14331.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1613_15
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11855..12745
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=T0AND1_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EPZ14384.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_1613_16
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12839..13651
DNA (813bp) protein (271aa)
membrane protein n=1 Tax=Burkholderia thailandensis RepID=UPI00016A8EE9
Methyltransferase domain protein {ECO:0000313|EMBL:KGD52954.1}; TaxID=28450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;
methyltransferase domain protein
SCNpilot_BF_INOC_scaffold_1613_17
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13659..14012
DNA (354bp) protein (118aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJW47692.1}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolily
SCNpilot_BF_INOC_scaffold_1613_18
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14009..14488
DNA (480bp) protein (160aa)
Nuclease-like protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A2X3_9PROT
nuclease Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1613_19
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14485..14808
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=T0AUR3_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EPZ14388.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
Displaying 19 items

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