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SCNpilot_BF_INOC_scaffold_1833

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1833_1
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..463
DNA (462bp) protein (154aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
UPI0003D59B21 related cluster n=1 Tax=unknown RepID=UPI0003D59B21
Histidyl-tRNA synthetase {ECO:0000313|EMBL:KGM10611.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
SCNpilot_BF_INOC_scaffold_1833_2
Paracoccus sp. 361, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

463..2283
DNA (1821bp) protein (607aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
isoleucyl-tRNA synthase n=1 Tax=Paracoccus zeaxanthinifaciens RepID=UPI0003B7391D
SCNpilot_BF_INOC_scaffold_1833_3
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2270..3304
DNA (1035bp) protein (345aa)
L-glyceraldehyde 3-phosphate reductase n=1 Tax=Paracoccus zeaxanthinifaciens RepID=UPI0003B49790
aldo/keto reductase rbh
Aldo/keto reductase {ECO:0000313|EMBL:AGT09450.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus
SCNpilot_BF_INOC_scaffold_1833_4
Paracoccus sp. 361, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3308..4306)
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Paracoccus zeaxanthinifaciens RepID=UPI0003B57C52
Uncharacterized protein {ECO:0000313|EMBL:KIX16800.1}; TaxID=1603292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 361
hypothetical protein
SCNpilot_BF_INOC_scaffold_1833_5
Paracoccus sp. 361, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4652..5455
DNA (804bp) protein (268aa)
RNA methyltransferase n=1 Tax=Paracoccus zeaxanthinifaciens RepID=UPI0003B4FD76
RNA methyltransferase {ECO:0000313|EMBL:KIX16801.1}; TaxID=1603292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 361.;
RNA methyltransferase rbh
SCNpilot_BF_INOC_scaffold_1833_6
Paracoccus sp. 361, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5546..5950
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Paracoccus zeaxanthinifaciens RepID=UPI0003B5FD42
Uncharacterized protein {ECO:0000313|EMBL:KIX16802.1}; TaxID=1603292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 361
hypothetical protein
SCNpilot_BF_INOC_scaffold_1833_7
Paracoccus sp. 361, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6156..6587
DNA (432bp) protein (144aa)
CoA-binding protein n=1 Tax=Paracoccus zeaxanthinifaciens RepID=UPI0003B572C1
CoA-binding protein {ECO:0000313|EMBL:KIX16803.1}; TaxID=1603292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 361.;"
CoA-binding domain-containing protein
SCNpilot_BF_INOC_scaffold_1833_8
Paracoccus sp. 361, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6789..7025
DNA (237bp) protein (79aa)
preprotein translocase subunit SecE n=1 Tax=Paracoccus zeaxanthinifaciens RepID=UPI0003B45BD2
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1603292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Parac
Preprotein translocase subunit SecE
SCNpilot_BF_INOC_scaffold_1833_9
Paracoccus sp. 361, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7199..7735
DNA (537bp) protein (179aa)
transcription antitermination protein NusG n=1 Tax=Paracoccus sp. N5 RepID=UPI0003665D0B
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1603292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobact
NusG antitermination factor rbh
SCNpilot_BF_INOC_scaffold_1833_10
Paracoccus sp. 361, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7814..8266
DNA (453bp) protein (151aa)
50S ribosomal protein L11 n=1 Tax=Paracoccus sp. N5 RepID=UPI00037A7591
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1603292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus s
rplK; 50S ribosomal protein L11
SCNpilot_BF_INOC_scaffold_1833_11
Paracoccus sp. 361, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8269..8967
DNA (699bp) protein (233aa)
50S ribosomal protein L1 n=1 Tax=Paracoccus zeaxanthinifaciens RepID=UPI0003B78193
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1603292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp
50S ribosomal protein L1
SCNpilot_BF_INOC_scaffold_1833_12
Paracoccus sp. 361, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9203..9718
DNA (516bp) protein (172aa)
50S ribosomal protein L10 n=1 Tax=Paracoccus zeaxanthinifaciens RepID=UPI0003B54C5B
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1603292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Par
rplJ; 50S ribosomal protein L10
SCNpilot_BF_INOC_scaffold_1833_13
Paracoccus sp. 361, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9784..10155
DNA (372bp) protein (124aa)
50S ribosomal protein L7 n=1 Tax=Paracoccus sp. N5 RepID=UPI0002174D5D
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1603292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccu
rplL; 50S ribosomal protein L7/L12
SCNpilot_BF_INOC_scaffold_1833_14
Paracoccus sp. 361, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10384..14289
DNA (3906bp) protein (1302aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta n=1 Tax=Paracoccus zeaxanthinifaciens RepID=UPI0003B5062F
rpoB; DNA-directed RNA polymerase subunit beta
SCNpilot_BF_INOC_scaffold_1833_15
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14232..14456
DNA (225bp) protein (75aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta n=3 Tax=Roseobacter RepID=RPOB_ROSDO
SCNpilot_BF_INOC_scaffold_1833_16
Paracoccus sp. 361, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14509..16917
DNA (2409bp) protein (803aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
hypothetical protein n=1 Tax=Paracoccus zeaxanthinifaciens RepID=UPI0003B700DA
Displaying 16 items

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