ggKbase home page

SCNpilot_BF_INOC_scaffold_1848

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1848_1
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2..727)
DNA (726bp) protein (242aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit bet
ATP synthase subunit beta n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T777_PALPW
ATP synthase f1 subunit beta
SCNpilot_BF_INOC_scaffold_1848_2
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(909..1496)
DNA (588bp) protein (196aa)
Transcriptional regulator, TetR family id=4959619 bin=GWC2_Bacteroidetes_40_22 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
TetR family transcriptional regulator Tax=GWA2_Bacteroidetes_40_15_curated
transcriptional regulator, tetr family
SCNpilot_BF_INOC_scaffold_1848_3
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1713..2252
DNA (540bp) protein (180aa)
Sigma-70 family RNA polymerase sigma factor id=2063296 bin=GWD2_Bacteroidales_45_23 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
rpoE; protein RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWC2_Bacteroidetes_46_850_curated
RNA polymerase sigma-70 factor
SCNpilot_BF_INOC_scaffold_1848_4
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2298..2591
DNA (294bp) protein (98aa)
id=2063294 bin=GWD2_Bacteroidales_45_23 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
id=2063294 Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_BF_INOC_scaffold_1848_5
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2584..3150
DNA (567bp) protein (189aa)
hypothetical protein
hypothetical protein MsalJ2_01717 id=2063291 bin=GWD2_Bacteroidales_45_23 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein MsalJ2_01717 Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_BF_INOC_scaffold_1848_6
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3193..3558
DNA (366bp) protein (122aa)
hypothetical protein AnHS1_08358 id=2063288 bin=GWD2_Bacteroidales_45_23 species=unknown genus=Eggerthella taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein AnHS1_08358 Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_BF_INOC_scaffold_1848_7
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3761..4006
DNA (246bp) protein (82aa)
Putative uncharacterized protein id=2063285 bin=GWD2_Bacteroidales_45_23 species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1848_8
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3999..5048
DNA (1050bp) protein (350aa)
Putative uncharacterized protein id=2063282 bin=GWD2_Bacteroidales_45_23 species=Mariniradius saccharolyticus genus=Mariniradius taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1848_9
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5051..6406
DNA (1356bp) protein (452aa)
Orn/DAP/Arg decarboxylase 2; K01586 diaminopimelate decarboxylase [EC:4.1.1.20] Tax=GWC2_Bacteroidetes_46_850_curated
Orn/DAP/Arg decarboxylase 2 id=2063278 bin=GWD2_Bacteroidales_45_23 species=Mariniradius saccharolyticus genus=Mariniradius taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Orn/DAP/Arg decarboxylase 2
SCNpilot_BF_INOC_scaffold_1848_10
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6427..8598
DNA (2172bp) protein (724aa)
peptidase M23 Tax=GWC2_Bacteroidetes_46_850_curated
Peptidase M23 id=3504046 bin=GWC2_Bacteroidetes_46_850 species=Mariniradius saccharolyticus genus=Mariniradius taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
peptidase M23
SCNpilot_BF_INOC_scaffold_1848_11
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8589..9893
DNA (1305bp) protein (435aa)
hypothetical protein Tax=GWC2_Bacteroidetes_46_850_curated
Putative uncharacterized protein id=3504047 bin=GWC2_Bacteroidetes_46_850 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
SCNpilot_BF_INOC_scaffold_1848_12
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9881..10495
DNA (615bp) protein (205aa)
tetratricopeptide domain-containing protein id=2063268 bin=GWD2_Bacteroidales_45_23 species=Mariniradius saccharolyticus genus=Mariniradius taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1848_13
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10505..11110)
DNA (606bp) protein (202aa)
Crp/Fnr family transcriptional regulator id=2063370 bin=GWD2_Bacteroidales_45_23 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1848_14
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11315..11881
DNA (567bp) protein (189aa)
Uncharacterized protein id=2063367 bin=GWD2_Bacteroidales_45_23 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1848_15
unknown

Not on your lists

11931..11990
DNA (60bp) protein (20aa)

This feature has no annotations

Displaying 15 items

View Taxonomy