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SCNpilot_BF_INOC_scaffold_1964

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1964_1
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..426)
DNA (426bp) protein (142aa)
Transposase IS66 (Fragment) n=2 Tax=Rhodobacter sp. SW2 RepID=C8S5Q6_9RHOB
Transposase IS66 {ECO:0000313|EMBL:EEW23681.1}; Flags: Fragment;; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodoba
transposase
SCNpilot_BF_INOC_scaffold_1964_2
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(485..832)
DNA (348bp) protein (116aa)
Similar to A1B818_PARDP IS66 Orf2 family protein n=1 Tax=Microcystis aeruginosa PCC 7806 RepID=A8Y9M7_MICAE
Similar to A1B818_PARDP IS66 Orf2 family protein {ECO:0000313|EMBL:CAO86215.1}; TaxID=267872 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis
IS66 Orf2 family protein
SCNpilot_BF_INOC_scaffold_1964_3
Paracoccus sp. 361, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1894..3327)
DNA (1434bp) protein (478aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI000360011D
Uncharacterized protein {ECO:0000313|EMBL:KIX16785.1}; TaxID=1603292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 361
hypothetical protein
SCNpilot_BF_INOC_scaffold_1964_4
unknown

Not on your lists

comp(3722..3877)
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1964_5
Paracoccus sp. 361, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4365..4907)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FPP3_PELBH
Isochorismatase {ECO:0000313|EMBL:KIX16457.1}; TaxID=1603292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 361.;"
isochorismatase hydrolase
SCNpilot_BF_INOC_scaffold_1964_6
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5267..5626
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Thauera phenylacetica B4P RepID=N6ZVT7_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO98597.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.
SCNpilot_BF_INOC_scaffold_1964_7
unknown

Not on your lists

comp(5699..5938)
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1964_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5969..10138
DNA (4170bp) protein (1390aa)
Uncharacterized protein (Fragment) n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X7W7_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD41297.1}; Flags: Fragment;; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia
phage tape measure protein
SCNpilot_BF_INOC_scaffold_1964_9
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10192..13257
DNA (3066bp) protein (1022aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U207_ALIDB
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADV01260.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
SCNpilot_BF_INOC_scaffold_1964_10
unknown

Not on your lists

comp(13188..14477)
DNA (1290bp) protein (430aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1964_11
unknown

Not on your lists

14794..15048
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1964_12
unknown

Not on your lists

15206..15493
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1964_13
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15819..15986)
DNA (168bp) protein (56aa)
Two-component system response regulator n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NZZ3_AROAE
two-component system response regulator
Two-component system response regulator {ECO:0000313|EMBL:CAI09371.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatol
SCNpilot_BF_INOC_scaffold_1964_14
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15983..17038)
DNA (1056bp) protein (352aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Va
Two component transcriptional regulator, sensor histidine kinase n=1 Tax=Variovorax paradoxus B4 RepID=T1XE63_VARPD
two component transcriptional regulator, sensor histidine kinase
SCNpilot_BF_INOC_scaffold_1964_15
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17097..18617)
DNA (1521bp) protein (507aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TA8_RHOFD
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ABD70995.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rh
SCNpilot_BF_INOC_scaffold_1964_16
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18659..19615)
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI0003752F72
porin Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
porin
SCNpilot_BF_INOC_scaffold_1964_17
Burkholderia lata, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19686..21317)
DNA (1632bp) protein (544aa)
AMP-dependent synthetase/ligase (EC:6.2.1.26)
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABB11502.1}; EC=6.2.1.26 {ECO:0000313|EMBL:ABB11502.1};; TaxID=482957 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burk
AMP-dependent synthetase and ligase n=1 Tax=Burkholderia sp. (strain 383) RepID=Q396V9_BURS3
SCNpilot_BF_INOC_scaffold_1964_18
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21431..22675
DNA (1245bp) protein (415aa)
ABC transporter substrate-binding protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000366A440
ABC-type branched-chain amino acid transport systems, periplasmic component {ECO:0000313|EMBL:GAD21322.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamon
extracellular ligand-binding receptor
SCNpilot_BF_INOC_scaffold_1964_19
Burkholderia pyrrocinia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22878..23756
DNA (879bp) protein (293aa)
Lysophospholipase (EC:3.1.1.5 3.1.1.23)
Hydrolase n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PCB5_9BURK
Alpha/beta hydrolase {ECO:0000313|EMBL:KFL55824.1}; TaxID=60550 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;"
SCNpilot_BF_INOC_scaffold_1964_20
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23887..24969
DNA (1083bp) protein (361aa)
ABC transporter substrate-binding protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034C7164
ABC transporter substrate-binding protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
ABC transporter substrate-binding protein
SCNpilot_BF_INOC_scaffold_1964_21
Burkholderia pyrrocinia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24973..26487
DNA (1515bp) protein (505aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000371B558
Uncharacterized protein {ECO:0000313|EMBL:KFL55827.1}; TaxID=60550 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.
ABC transporter ATP-binding protein
SCNpilot_BF_INOC_scaffold_1964_22
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26484..27410
DNA (927bp) protein (309aa)
sugar ABC transporter permease n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000349B5FC
teuC1; sugar ABC transporter, permease protein TeuC1 Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
teuC1; sugar ABC transporter, permease protein TeuC1
SCNpilot_BF_INOC_scaffold_1964_23
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27419..28375
DNA (957bp) protein (319aa)
sugar ABC transporter permease n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000346CA5C
inner-membrane translocator Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
teuC2; sugar ABC transporter, permease protein TeuC2
SCNpilot_BF_INOC_scaffold_1964_24
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28703..28924
DNA (222bp) protein (74aa)
Inner-membrane translocator n=2 Tax=Thauera RepID=C4ZNH5_THASP
branched-chain amino acid ABC transporter permease
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:ENO97852.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source=
SCNpilot_BF_INOC_scaffold_1964_25
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29078..29395)
DNA (318bp) protein (106aa)
Putative periplasmic or secreted lipoprotein n=1 Tax=Acidovorax sp. CF316 RepID=J1EAF1_9BURK
Transporter {ECO:0000313|EMBL:KJA09994.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
transport-associated protein
SCNpilot_BF_INOC_scaffold_1964_26
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29555..29944)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002377F8F
hypothetical protein Tax=GWA2_Burkholderiales_64_37_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1964_27
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30030..31637)
DNA (1608bp) protein (536aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TTX0_ACIAC
multi-sensor signal transduction histidine kinase
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:ABM34408.1}; Flags: Precursor;; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
SCNpilot_BF_INOC_scaffold_1964_28

Not on your lists

32106..32354
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CXD7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD97635.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
response regulator receiver
SCNpilot_BF_INOC_scaffold_1964_29
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32344..32733)
DNA (390bp) protein (130aa)
Response regulator receiver protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TTW8_ACIAC
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:EJE49245.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderia
response regulator receiver protein
SCNpilot_BF_INOC_scaffold_1964_30
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33628..34536)
DNA (909bp) protein (303aa)
Carboxyl-terminal protease {ECO:0000313|EMBL:EER59033.1}; EC=3.4.21.102 {ECO:0000313|EMBL:EER59033.1};; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholde
carboxyl-terminal protease (EC:3.4.21.102)
Carboxyl-terminal protease n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T909_ACIDE
Displaying 30 items

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