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SCNpilot_BF_INOC_scaffold_2245

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2245_1
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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2..559
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI0003695F30
traI; DNA relaxase
Tax=BJP_IG2103_Dechloromonas_60_92
SCNpilot_BF_INOC_scaffold_2245_2
Xanthomonas alfalfae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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795..1586
DNA (792bp) protein (264aa)
Conjugal transfer protein TrbJ n=1 Tax=Xanthomonas axonopodis pv. citrumelo F1 RepID=G2LUL5_9XANT
conjugal transfer protein TrbJ
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:AEO42549.1}; TaxID=981368 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas
SCNpilot_BF_INOC_scaffold_2245_3
Xanthomonas euvesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1599..1838
DNA (240bp) protein (80aa)
Entry exclusion protein TrbK n=1 Tax=Xanthomonas campestris pv. vesicatoria (strain 85-10) RepID=Q3BTM2_XANC5
trbK; entry exclusion protein TrbK
Entry exclusion protein TrbK {ECO:0000313|EMBL:CAJ23837.1}; Flags: Precursor;; TaxID=316273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" so
SCNpilot_BF_INOC_scaffold_2245_4
Xanthomonas alfalfae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1843..3513
DNA (1671bp) protein (557aa)
Conjugal transfer protein TrbL n=1 Tax=Xanthomonas axonopodis pv. citrumelo F1 RepID=G2LUL3_9XANT
conjugal transfer protein TrbL
Conjugal transfer protein TrbL {ECO:0000313|EMBL:AEO42547.1}; TaxID=981368 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas
SCNpilot_BF_INOC_scaffold_2245_5
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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3578..3883
DNA (306bp) protein (102aa)
Tax=BJP_IG2103_Dechloromonas_60_92
SCNpilot_BF_INOC_scaffold_2245_6
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3975..4169)
DNA (195bp) protein (65aa)
Uncharacterized protein {ECO:0000313|EMBL:ACS64112.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (
SCNpilot_BF_INOC_scaffold_2245_7
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4408..4980
DNA (573bp) protein (191aa)
Putative resolvase n=1 Tax=Pseudomonas alcaligenes RepID=Q9XAW5_PSEAC
Putative resolvase {ECO:0000313|EMBL:AAD40331.1}; TaxID=43263 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes.
recombinase
SCNpilot_BF_INOC_scaffold_2245_8
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4995..5897
DNA (903bp) protein (301aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=43263 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; P
Pac25I methylase n=1 Tax=Pseudomonas alcaligenes RepID=Q9XAW6_PSEAC
Site-specific DNA-methyltransferase (cytosine-N(4)-specific).
SCNpilot_BF_INOC_scaffold_2245_9
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5894..6895
DNA (1002bp) protein (334aa)
Pac25I endonuclease n=1 Tax=Pseudomonas alcaligenes RepID=Q9XAW7_PSEAC
Pac25I endonuclease {ECO:0000313|EMBL:AAD40333.1}; TaxID=43263 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes
Probable Type II restriction endonuclease XcyI
SCNpilot_BF_INOC_scaffold_2245_10
unknown

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6938..7099
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2245_11
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7183..7812
DNA (630bp) protein (210aa)
ParA n=1 Tax=Xanthomonas axonopodis RepID=UPI0002ED2017
parA; ATPase involved in chromosome partitioning
ATPase involved in chromosome partitioning {ECO:0000313|EMBL:BAO84639.1}; TaxID=1458426 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae
SCNpilot_BF_INOC_scaffold_2245_12
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7833..8048
DNA (216bp) protein (72aa)
ParB n=2 Tax=Proteobacteria RepID=Q6X3G7_PSEAI
parB; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO84640.1}; TaxID=1458426 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium B1.;"
SCNpilot_BF_INOC_scaffold_2245_13
CG_Rhodof_01, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8281..8736
DNA (456bp) protein (152aa)
TrfA family protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VX05_POLNA
TrfA family protein Tax=CG_Rhodof_01
TrfA family protein
Displaying 13 items

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