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SCNpilot_BF_INOC_scaffold_2886

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2886_1
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(209..724)
DNA (516bp) protein (172aa)
ABC transporter substrate-binding protein n=1 Tax=Pseudomonas putida RepID=UPI0002FF4482
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AJW44616.1}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ral
SCNpilot_BF_INOC_scaffold_2886_2
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(742..876)
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TWP8_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENO79242.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
SCNpilot_BF_INOC_scaffold_2886_3
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1127..1519)
DNA (393bp) protein (131aa)
Uncharacterized protein n=18 Tax=Proteobacteria RepID=A1W820_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EWC41179.1}; TaxID=1218352 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutz
SCNpilot_BF_INOC_scaffold_2886_4
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1545..1781)
DNA (237bp) protein (79aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=F8H1X5_PSEUT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ04466.1}; TaxID=96563 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzer
SCNpilot_BF_INOC_scaffold_2886_5
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2561..4576)
DNA (2016bp) protein (672aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518};; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae
DNA topoisomerase III (EC:5.99.1.2)
DNA topoisomerase III n=1 Tax=Pseudomonas aeruginosa MH27 RepID=V6AJY9_PSEAI
SCNpilot_BF_INOC_scaffold_2886_6
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4871..5254)
DNA (384bp) protein (128aa)
Single-stranded DNA-binding protein n=14 Tax=Proteobacteria RepID=A2SIA8_METPP
single-stranded DNA-binding protein
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070, ECO:0000313|EMBL:KIL06466.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; P
SCNpilot_BF_INOC_scaffold_2886_7
Pseudomonas balearica, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5251..5493)
DNA (243bp) protein (81aa)
integrase n=1 Tax=Proteobacteria RepID=UPI0003028F71
integrase
Integrase {ECO:0000313|EMBL:AJE16290.1}; TaxID=1123016 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas balearica DSM 6083.
SCNpilot_BF_INOC_scaffold_2886_8
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5725..6495)
DNA (771bp) protein (257aa)
integrating conjugative element protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036C49C4
Conserved domain protein {ECO:0000313|EMBL:GAO21679.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus s
hypothetical protein
SCNpilot_BF_INOC_scaffold_2886_9
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6731..7879)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa str. Stone 130 RepID=N2CXV7_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:GAO21678.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp
hypothetical protein
SCNpilot_BF_INOC_scaffold_2886_10
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7919..8479)
DNA (561bp) protein (187aa)
coproporphyrinogen III oxidase n=1 Tax=Azoarcus toluclasticus RepID=UPI0003816CD5
Uncharacterized protein {ECO:0000313|EMBL:GAO21677.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp
hypothetical protein
SCNpilot_BF_INOC_scaffold_2886_11
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8495..10189)
DNA (1695bp) protein (565aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P598_AROAE
Protein with ParB-like nuclease domain {ECO:0000313|EMBL:GAO21676.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Al
hypothetical protein
SCNpilot_BF_INOC_scaffold_2886_12
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10182..10442)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P597_AROAE
Uncharacterized protein {ECO:0000313|EMBL:GAO21675.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp
hypothetical protein
SCNpilot_BF_INOC_scaffold_2886_13
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10426..11295)
DNA (870bp) protein (290aa)
Chromosome partitioning protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P596_AROAE
Chromosome partitioning ATPase {ECO:0000313|EMBL:GAO21674.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliph
soj; chromosome partitioning protein rbh
SCNpilot_BF_INOC_scaffold_2886_14
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11340..11552)
DNA (213bp) protein (71aa)
Putative transcriptional regulator,possibly phage-related n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P595_AROAE
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:GAO21673.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus
SCNpilot_BF_INOC_scaffold_2886_15
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11729..12475)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P594_AROAE
Receptor protein-tyrosine kinase {ECO:0000313|EMBL:GAO21672.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycli
hypothetical protein
SCNpilot_BF_INOC_scaffold_2886_16
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13355..13819
DNA (465bp) protein (155aa)
Uncharacterized protein n=3 Tax=Cupriavidus RepID=Q58AM8_RALME
bimB2; negative regulation of plasmid gene expression transcriptional repressor activity
Uncharacterized protein {ECO:0000313|EMBL:CAI11239.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidu
SCNpilot_BF_INOC_scaffold_2886_17
unknown

Not on your lists

14318..14512
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2886_18
Pseudomonas xanthomarina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14630..14827)
DNA (198bp) protein (66aa)
Uncharacterized protein {ECO:0000313|EMBL:CEG55408.1}; TaxID=271420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas xantho
SCNpilot_BF_INOC_scaffold_2886_19
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14903..15598)
DNA (696bp) protein (232aa)
Putative Cytochrome c biogenesis protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CMA1_THIA3
cytochrome c biogenesis protein, transmembrane region Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
putative Cytochrome c biogenesis protein
SCNpilot_BF_INOC_scaffold_2886_20
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15600..15860)
DNA (261bp) protein (87aa)
Glutaredoxin-like protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QSW8_9BRAD
Glutaredoxin-like protein {ECO:0000313|EMBL:EIG62874.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium s
thioredoxin/glutaredoxin
SCNpilot_BF_INOC_scaffold_2886_21
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15850..16413)
DNA (564bp) protein (188aa)
Transcriptional regulator, MerR family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFJ2_NITHX
MerR family transcriptional regulator
Bradyrhizobium elkanii strain UASWS1015 Contig140, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53547.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
Displaying 21 items

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