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SCNpilot_BF_INOC_scaffold_3752

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_3752_1
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..165)
DNA (165bp) protein (55aa)
Type I restriction modification DNA specificity domain protein n=1 Tax=Corynebacterium matruchotii ATCC 33806 RepID=C0E6A7_9CORY
Putative restriction-modification system specificity determinant {ECO:0000313|EMBL:CEG95025.1}; TaxID=1744 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacteri
SCNpilot_BF_INOC_scaffold_3752_2
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(162..491)
DNA (330bp) protein (110aa)
N-6 DNA methylase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6Y4_9MICO
N-6 DNA methylase {ECO:0000313|EMBL:EIC07420.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
DNA methyltransferase
SCNpilot_BF_INOC_scaffold_3752_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(653..1987)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07TG4_RHOP5
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABJ04770.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" sourc
SCNpilot_BF_INOC_scaffold_3752_4
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2212..3534)
DNA (1323bp) protein (441aa)
Acetamidase/Formamidase n=1 Tax=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) RepID=B9KU07_RHOSK
Acetamidase {ECO:0000313|EMBL:EZQ13282.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
Acetamidase/Formamidase rbh
SCNpilot_BF_INOC_scaffold_3752_5
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3781..4848
DNA (1068bp) protein (356aa)
choloylglycine hydrolase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D62689
Choloylglycine hydrolase
Choloylglycine hydrolase {ECO:0000313|EMBL:ACI52037.1}; Flags: Precursor;; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;"
SCNpilot_BF_INOC_scaffold_3752_6
Ketogulonicigenium vulgare, Ketogulonicigenium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5065..5499)
DNA (435bp) protein (145aa)
Bile acid:sodium symporter n=2 Tax=Ketogulonicigenium vulgare RepID=E3F0L0_KETVY
sodium/bile acid symporter family (MazG-like protein)
Putative sodium/bile acid symporter family (MazG-like protein) {ECO:0000313|EMBL:AEM39940.1}; TaxID=759362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ke
SCNpilot_BF_INOC_scaffold_3752_7
unknown

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5556..5672
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_3752_8
unknown

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5873..6175
DNA (303bp) protein (101aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_3752_9
Agrobacterium fabrum, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6407..7165)
DNA (759bp) protein (253aa)
ABC transporter, nucleotide binding/ATPase protein (Amino acid) n=2 Tax=Agrobacterium RepID=A9CIW5_AGRT5
ABC transporter, nucleotide binding/ATPase protein (amino acid)
ABC transporter, nucleotide binding/ATPase protein (Amino acid) {ECO:0000313|EMBL:AAK87363.1}; TaxID=176299 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium
SCNpilot_BF_INOC_scaffold_3752_10
Thalassobacter sp. 16PALIMAR09, Thalassobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7189..7872)
DNA (684bp) protein (228aa)
Transcriptional regulator, GntR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XIB3_VARPD
Transcriptional regulator {ECO:0000313|EMBL:KGL02893.1}; TaxID=1225651 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobacter.;" source="Thalassobact
transcriptional regulator, GntR family
SCNpilot_BF_INOC_scaffold_3752_11
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8178..9041)
DNA (864bp) protein (288aa)
HpcH/HpaI aldolase; K02510 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [EC:4.1.2.-] Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
HpcH/HpaI aldolase n=1 Tax=Burkholderia graminis C4D1M RepID=B1G3C8_9BURK
hpcH/HpaI aldolase/citrate lyase family protein
SCNpilot_BF_INOC_scaffold_3752_12
Burkholderia vietnamiensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9156..9500)
DNA (345bp) protein (115aa)
Peptidase M24 n=2 Tax=Burkholderia cepacia complex RepID=A4JLZ0_BURVG
pepP; peptidase
Peptidase M24 {ECO:0000313|EMBL:ABO57293.1}; TaxID=269482 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source
Displaying 12 items

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