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SCNpilot_BF_INOC_scaffold_4485

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_4485_1
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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228..938
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003629034
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CCV07543.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="M
Short-chain dehydrogenase/reductase SDR
SCNpilot_BF_INOC_scaffold_4485_2
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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950..2161
DNA (1212bp) protein (404aa)
acyl-CoA dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037C1797
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ESZ18396.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
acyl-CoA dehydrogenase domain-containing protein
SCNpilot_BF_INOC_scaffold_4485_3
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2172..3215
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003667C06
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ESZ18397.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhi
aminoglycoside phosphotransferase
SCNpilot_BF_INOC_scaffold_4485_4
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3245..4009)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031923FB
ABC transporter {ECO:0000313|EMBL:EXL08999.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
branched-chain amino acid ABC transporter ATP-binding protein
SCNpilot_BF_INOC_scaffold_4485_5
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4006..4779)
DNA (774bp) protein (258aa)
branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F0B1D5
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:EZQ15300.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadacea
branched-chain amino acid ABC transporter ATP-binding protein
SCNpilot_BF_INOC_scaffold_4485_6
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4791..5459)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000307AE88
ABC transporter permease {ECO:0000313|EMBL:EXL09001.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defl
livM; High-affinity branched-chain amino acid transport system permease protein LivM (LIV-I protein M)
SCNpilot_BF_INOC_scaffold_4485_7
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5892..6884)
DNA (993bp) protein (331aa)
ABC transporter permease n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031197AF
ABC transporter permease {ECO:0000313|EMBL:EZQ15302.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauza
putative ABC transporter subunit
SCNpilot_BF_INOC_scaffold_4485_8
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6979..8322)
DNA (1344bp) protein (448aa)
branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002EF22F4
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:EXL09003.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae;
branched-chain amino acid ABC transporter substrate-binding protein
SCNpilot_BF_INOC_scaffold_4485_9
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8487..9980
DNA (1494bp) protein (498aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003007CA6
Uncharacterized protein {ECO:0000313|EMBL:EXL09004.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium deflu
XRE family transcriptional regulator
SCNpilot_BF_INOC_scaffold_4485_10
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10011..11258)
DNA (1248bp) protein (416aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aqu
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002ED426D
sensor histidine kinase
SCNpilot_BF_INOC_scaffold_4485_11
unknown

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11558..11794
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_4485_12
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12087..12614)
DNA (528bp) protein (176aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aqu
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002ED426D
sensor histidine kinase
SCNpilot_BF_INOC_scaffold_4485_13
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12614..12910)
DNA (297bp) protein (99aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB13117.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
SCNpilot_BF_INOC_scaffold_4485_14
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12912..13292)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E4DFD3
Chemotaxis protein CheY {ECO:0000313|EMBL:KKB83738.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;
DNA-binding response regulator
SCNpilot_BF_INOC_scaffold_4485_15
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13604..14503
DNA (900bp) protein (300aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3I292_9RHIZ
Displaying 15 items

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