ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCNpilot_BF_INOC_scaffold_5136

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_5136_1
unknown

Not on your lists

comp(3..146)
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_5136_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

252..1547
DNA (1296bp) protein (432aa)
Radical SAM n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8K3_NITMU
Radical SAM protein {ECO:0000313|EMBL:KIO48465.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV
radical SAM family protein
SCNpilot_BF_INOC_scaffold_5136_3
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1778..2698
DNA (921bp) protein (307aa)
Lipopolysaccharide biosynthesis protein-like protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9U6_NITMU
lipopolysaccharide biosynthesis protein
Lipopolysaccharide biosynthesis protein-like protein {ECO:0000313|EMBL:ABB74475.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospir
SCNpilot_BF_INOC_scaffold_5136_4
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2753..3844
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-133-C04 RepID=UPI00037D2134
glycosyl transferase family protein
Putative glycosyl transferase, family 2 {ECO:0000313|EMBL:ABA75779.1}; TaxID=205922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Ps
SCNpilot_BF_INOC_scaffold_5136_5
Legionella norrlandica, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3966..4229)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-133-C04 RepID=UPI0003822957
Galactoside O-acetyltransferase {ECO:0000313|EMBL:KGP64013.1}; TaxID=1498499 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella nor
hexapaptide repeat-containing transferase
SCNpilot_BF_INOC_scaffold_5136_6
Legionella norrlandica, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4309..4482)
DNA (174bp) protein (58aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-133-C04 RepID=UPI0003822957
Galactoside O-acetyltransferase {ECO:0000313|EMBL:KGP64013.1}; TaxID=1498499 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella nor
hexapeptide repeat-containing transferase
SCNpilot_BF_INOC_scaffold_5136_7
Burkholderia sp. lig30, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4504..5118)
DNA (615bp) protein (205aa)
Aminotransferase, DegT/DnrJ/EryC1/StrS family n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MDY7_PSEPS
DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:KDB10599.1}; TaxID=1192124 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Bur
aminotransferase DegT/DnrJ/EryC1/StrS family
SCNpilot_BF_INOC_scaffold_5136_8
Oxalobacteraceae bacterium IMCC9480, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5204..5617)
DNA (414bp) protein (138aa)
aminotransferase n=1 Tax=zeta proteobacterium SCGC AB-133-C04 RepID=UPI00036BE352
Aminotransferase, DegT/DnrJ/EryC1/StrS family {ECO:0000313|EMBL:EGF30544.1}; TaxID=937450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae.;" source="Oxalobacte
aminotransferase, DegT/DnrJ/EryC1/StrS family
SCNpilot_BF_INOC_scaffold_5136_9
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5929..6222)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJG4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62889.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira la
hypothetical protein
Displaying 9 items

View Taxonomy