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SCNpilot_BF_INOC_scaffold_5760

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_5760_1
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..548)
DNA (546bp) protein (182aa)
UPI0003CF741A related cluster n=1 Tax=unknown RepID=UPI0003CF741A
Lipid A core--O-antigen ligase {ECO:0000313|EMBL:EZQ16909.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
lipid A core-O-antigen ligase-like enyme
SCNpilot_BF_INOC_scaffold_5760_2
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(769..1803)
DNA (1035bp) protein (345aa)
UPI0003CF5BFC related cluster n=1 Tax=unknown RepID=UPI0003CF5BFC
Uncharacterized protein {ECO:0000313|EMBL:EZQ17056.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzan
hypothetical protein
SCNpilot_BF_INOC_scaffold_5760_3
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1916..4288)
DNA (2373bp) protein (791aa)
Putative Exopolysaccharide biosynthesis protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EHI9_9RHIZ
Exopolysaccharide biosynthesis protein {ECO:0000313|EMBL:EZQ16910.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
capsular exopolysaccharide biosynthesis protein
SCNpilot_BF_INOC_scaffold_5760_4
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4422..5177)
DNA (756bp) protein (252aa)
UPI0003CE8748 related cluster n=1 Tax=unknown RepID=UPI0003CE8748
Sugar transporter {ECO:0000313|EMBL:EZQ16911.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.
periplasmic protein involved in polysaccharide export
SCNpilot_BF_INOC_scaffold_5760_5
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5182..5991)
DNA (810bp) protein (270aa)
UPI0003D02935 related cluster n=1 Tax=unknown RepID=UPI0003D02935
Capsular biosynthesis protein {ECO:0000313|EMBL:EXL10136.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium
capsular polysaccharide biosynthesis protein
SCNpilot_BF_INOC_scaffold_5760_6
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6131..6649)
DNA (519bp) protein (173aa)
UPI0003CF6654 related cluster n=1 Tax=unknown RepID=UPI0003CF6654
Uncharacterized protein {ECO:0000313|EMBL:ESY71594.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
SCNpilot_BF_INOC_scaffold_5760_7
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6743..7207)
DNA (465bp) protein (155aa)
UPI0003CFE0E5 related cluster n=1 Tax=unknown RepID=UPI0003CFE0E5
Uncharacterized protein {ECO:0000313|EMBL:EZQ17058.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzan
hypothetical protein
SCNpilot_BF_INOC_scaffold_5760_8
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7215..8186)
DNA (972bp) protein (324aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxI
wcaG; nucleotide di-P-sugar epimerase or dehydratase (EC:1.1.1.271)
GDP-L-fucose synthase n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CP03_9RHOB
SCNpilot_BF_INOC_scaffold_5760_9
Roseovarius sp. BRH_c41, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8187..8351)
DNA (165bp) protein (55aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1629709 species="Bacte
GDP-mannose 4,6-dehydratase n=1 Tax=Roseovarius sp. 217 RepID=A3W0V9_9RHOB
GDP-mannose 4,6-dehydratase
Displaying 9 items

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