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SCNpilot_BF_INOC_scaffold_6333

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_6333_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..202)
DNA (201bp) protein (67aa)
RNA polymerase sigma factor n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11DP6_MESSB
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ECF subfamily RNA polymerase sigma-70 factor
SCNpilot_BF_INOC_scaffold_6333_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(189..410)
DNA (222bp) protein (74aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC70892.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_BF_INOC_scaffold_6333_3
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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624..2129
DNA (1506bp) protein (502aa)
ABC transporter substrate-binding protein n=1 Tax=Rhizobium leguminosarum RepID=UPI0003634D1B
Leu/Ile/Val-binding protein homolog 5
Leu/Ile/Val-binding protein homolog 5 {ECO:0000313|EMBL:CDM58948.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhiz
SCNpilot_BF_INOC_scaffold_6333_4
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2182..2901
DNA (720bp) protein (240aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0UTI0_RHILV
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:EJC63963.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhi
ATP-binding ABC transporter component
SCNpilot_BF_INOC_scaffold_6333_5
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2901..3608
DNA (708bp) protein (236aa)
High-affinity branched-chain amino acid transport protein (ABC superfamily, atp_bind) n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RRZ1_9BRAD
High-affinity branched-chain amino acid transport protein (ABC superfamily, atp_bind) {ECO:0000313|EMBL:CCD84718.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; B
livF; high-affinity branched-chain amino acid ABC transporter ATP-binding protein
SCNpilot_BF_INOC_scaffold_6333_6
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3580..4443
DNA (864bp) protein (288aa)
ABC transporter permease n=1 Tax=Rhizobium leguminosarum RepID=UPI00027D8FB1
ABC transporter permease
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:EJC63961.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; R
SCNpilot_BF_INOC_scaffold_6333_7
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4443..5531
DNA (1089bp) protein (363aa)
ABC transporter permease n=1 Tax=Rhizobium gallicum RepID=UPI0003647BC4
ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:EJC63960.1}; Flags: Precursor;; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobial
inner-membrane translocator
SCNpilot_BF_INOC_scaffold_6333_8
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5524..7278
DNA (1755bp) protein (585aa)
Monooxygenase FAD-binding n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6B8W2_RHILS
monooxygenase FAD-binding rbh
Monooxygenase FAD-binding {ECO:0000313|EMBL:ACS60350.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sou
SCNpilot_BF_INOC_scaffold_6333_9
unknown

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comp(7256..7654)
DNA (399bp) protein (133aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_6333_10
Pseudomonas kilonensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8238..8714)
DNA (477bp) protein (159aa)
Transcriptional regulator, GntR family protein n=1 Tax=Pseudomonas sp. CFII64 RepID=S6I6U5_9PSED
GntR family transcriptional regulator {ECO:0000313|EMBL:KKA09967.1}; TaxID=132476 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseu
csiR; HTH-type transcriptional repressor CsiR
SCNpilot_BF_INOC_scaffold_6333_11
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9006..10040
DNA (1035bp) protein (345aa)
Fumarylacetoacetate (FAA) hydrolase family protein 10 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HHE1_ACHXA
fumarylacetoacetate hydrolase
Fumarylacetoacetate (FAA) hydrolase family protein 10 {ECO:0000313|EMBL:ADP19091.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.
SCNpilot_BF_INOC_scaffold_6333_12
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10067..10585
DNA (519bp) protein (173aa)
glucose-1-dehydrogenase n=1 Tax=Variovorax paradoxus RepID=UPI000370FEC6
Uncharacterized protein {ECO:0000313|EMBL:KHQ95712.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
putative oxidoreductase, SDR family
SCNpilot_BF_INOC_scaffold_6333_13

Not on your lists

10655..11599
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000300E356
Bacterial extracellular solute-binding protein, family 7 {ECO:0000313|EMBL:AGU10620.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
TRAP dicarboxylate transporter subunit DctP
SCNpilot_BF_INOC_scaffold_6333_14

Not on your lists

12165..13457
DNA (1293bp) protein (431aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002FD648B
DctM-like transporter {ECO:0000313|EMBL:AGU10594.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
TRAP dicarboxylate transporter subunit DctM
SCNpilot_BF_INOC_scaffold_6333_15
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13473..13793
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000319824A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA60807.1}; TaxID=999541 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladi
SCNpilot_BF_INOC_scaffold_6333_16
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13806..14066
DNA (261bp) protein (87aa)
UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:CAJ95084.1}; EC=5.1.3.2 {ECO:0000313|EMBL:CAJ95084.1};; TaxID=381666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae;
UDP-glucose 4-epimerase n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0K4J0_CUPNH
SCNpilot_BF_INOC_scaffold_6333_17
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14261..14731
DNA (471bp) protein (157aa)
UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:CAJ95084.1}; EC=5.1.3.2 {ECO:0000313|EMBL:CAJ95084.1};; TaxID=381666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae;
UDP-glucose 4-epimerase n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0K4J0_CUPNH
SCNpilot_BF_INOC_scaffold_6333_18
unknown

Not on your lists

14836..15105
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_6333_19
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15313..16089)
DNA (777bp) protein (259aa)
Transcriptional regulator, DeoR family n=1 Tax=Rhodobacter sp. SW2 RepID=C8S158_9RHOB
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EEW25256.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rho
DeoR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_6333_20
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16399..17544)
DNA (1146bp) protein (382aa)
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit n=1 Tax=Rhodobacter sp. SW2 RepID=C8S164_9RHOB
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit {ECO:0000313|EMBL:EEW25262.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rho
rbcL2; ribulose bisphosphate carboxylase large chain 1
Displaying 20 items

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