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SCNpilot_BF_INOC_scaffold_7518

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_7518_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..547
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WN39_DELAC
tail sheath protein
Tail sheath protein {ECO:0000313|EMBL:ABX35230.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain D
SCNpilot_BF_INOC_scaffold_7518_2
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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544..801
DNA (258bp) protein (86aa)
Putative Fe-S protein n=1 Tax=Variovorax sp. CF313 RepID=J2TNI7_9BURK
Putative Fe-S protein {ECO:0000313|EMBL:EJL80252.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_7518_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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798..1445
DNA (648bp) protein (216aa)
DSBA oxidoreductase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V7C2_VARPE
dsba oxidoreductase
DSBA oxidoreductase {ECO:0000313|EMBL:ADU39491.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (stra
SCNpilot_BF_INOC_scaffold_7518_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1627..2070
DNA (444bp) protein (148aa)
Putative proline/betaine transporter n=1 Tax=Variovorax paradoxus B4 RepID=T1XIG3_VARPD
putative proline/betaine transporter
Putative proline/betaine transporter {ECO:0000313|EMBL:AGU51925.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovor
SCNpilot_BF_INOC_scaffold_7518_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2716..3186
DNA (471bp) protein (157aa)
major facilitator transporter n=1 Tax=Variovorax paradoxus RepID=UPI00035D6812
Variovorax paradoxus strain MEDvA23 contig_21, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ33510.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
general substrate transporter
SCNpilot_BF_INOC_scaffold_7518_6
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3318..4376
DNA (1059bp) protein (353aa)
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobac
Alcohol dehydrogenase, class III n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RE03_PHEZH
alcohol dehydrogenase
SCNpilot_BF_INOC_scaffold_7518_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(4453..4863)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKJ8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF59668.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedo
GxxExxY protein
SCNpilot_BF_INOC_scaffold_7518_8

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comp(4962..5492)
DNA (531bp) protein (177aa)
Putative tRNA-specific adenosine deaminase n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GFU0_KOCRD
Marine sediment metagenome DNA, contig: S12H4_L02225 {ECO:0000313|EMBL:GAI81698.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
putative deaminase
SCNpilot_BF_INOC_scaffold_7518_9
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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comp(5788..6975)
DNA (1188bp) protein (396aa)
Similar to histidine kinase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q5K3_9BACT
putative histidine kinase
Putative histidine kinase {ECO:0000313|EMBL:AIE84573.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas gins
SCNpilot_BF_INOC_scaffold_7518_10
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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7278..7811
DNA (534bp) protein (178aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E875_9GAMM
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:EGV27696.1}; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorho
PAS/PAC sensor signal transduction histidine kinase
SCNpilot_BF_INOC_scaffold_7518_11
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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7855..10176
DNA (2322bp) protein (774aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI0003732C36
two-component system sensor protein
Two-component system sensor protein {ECO:0000313|EMBL:AIE86008.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbrii
SCNpilot_BF_INOC_scaffold_7518_12
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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10176..10919
DNA (744bp) protein (248aa)
Response regulator receiver modulated metal dependent phosphohydrolase n=1 Tax=Paenibacillus curdlanolyticus YK9 RepID=E0IAC6_9BACL
response regulator; K07814 putative two-component system response regulator Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
response regulator receiver modulated metal dependent phosphohydrolase
Displaying 12 items

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