ggKbase home page

SCNpilot_BF_INOC_scaffold_7874

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_7874_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..551
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NE12_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88995.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter de
SCNpilot_BF_INOC_scaffold_7874_2
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

674..1672
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI000382191E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP47996.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
SCNpilot_BF_INOC_scaffold_7874_3
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1674..1877
DNA (204bp) protein (68aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP47997.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
SCNpilot_BF_INOC_scaffold_7874_4
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1861..2154
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QXE0_9ZZZZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP47998.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
SCNpilot_BF_INOC_scaffold_7874_5
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2171..2482
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QXD9_9ZZZZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP47999.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
SCNpilot_BF_INOC_scaffold_7874_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2343..2996)
DNA (654bp) protein (218aa)
ATP-dependent helicase n=1 Tax=Variovorax paradoxus RepID=UPI000381765D
ATP-dependent helicase HrpA
ATP-dependent helicase HrpA {ECO:0000313|EMBL:ACS19345.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradox
SCNpilot_BF_INOC_scaffold_7874_7
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3271..4359
DNA (1089bp) protein (363aa)
ATP-dependent Zn protease n=1 Tax=Variovorax sp. CF313 RepID=J3CQR5_9BURK
ATP-dependent Zn protease {ECO:0000313|EMBL:EJL76599.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF31
peptidase m41
SCNpilot_BF_INOC_scaffold_7874_8
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(4167..4730)
DNA (564bp) protein (188aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus communis RepID=B9TIE6_RICCO
Putative uncharacterized protein {ECO:0000313|EMBL:EEF24367.1}; Flags: Fragment;; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; e
hypothetical protein
SCNpilot_BF_INOC_scaffold_7874_9
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5067..5357
DNA (291bp) protein (97aa)
ATP-dependent Zn protease n=1 Tax=Variovorax sp. CF313 RepID=J3CQR5_9BURK
ATP-dependent Zn protease {ECO:0000313|EMBL:EJL76599.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF31
peptidase m41
SCNpilot_BF_INOC_scaffold_7874_10
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5420..5572
DNA (153bp) protein (51aa)
Amino-acid acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01105}; EC=2.3.1.1 {ECO:0000256|HAMAP-Rule:MF_01105};; N-acetylglutamate synthase {ECO:0000256|HAMAP-Rule:MF_01105}; TaxID=34073 species="Bacter
amino acid acetyltransferase n=1 Tax=Variovorax paradoxus RepID=UPI0003799D56
amino-acid N-acetyltransferase
Displaying 10 items

View Taxonomy