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SCNpilot_BF_INOC_scaffold_8018

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_8018_1
unknown

Not on your lists

comp(3..188)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_8018_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(295..507)
DNA (213bp) protein (71aa)
Glycerol-3-phosphate dehydrogenase GlpD {ECO:0000313|EMBL:EYR82675.1}; EC=1.1.5.3 {ECO:0000313|EMBL:EYR82675.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhi
SCNpilot_BF_INOC_scaffold_8018_3
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(657..1319)
DNA (663bp) protein (221aa)
FAD dependent oxidoreductase n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BV73_9RHIZ
FAD dependent oxidoreductase {ECO:0000313|EMBL:EIM73475.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratired
FAD dependent oxidoreductase
SCNpilot_BF_INOC_scaffold_8018_4
unknown

Not on your lists

1348..1596
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_8018_5
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1717..2211)
DNA (495bp) protein (165aa)
L-cystine import ATP-binding protein (EC:3.6.3.-)
Arginine transport ATP-binding protein ArtM n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HSV6_9RHIZ
Arginine transport ATP-binding protein ArtM {ECO:0000313|EMBL:EPE96311.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group
SCNpilot_BF_INOC_scaffold_8018_6
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2238..2462)
DNA (225bp) protein (75aa)
ABC transporter n=1 Tax=Streptomyces violaceoniger RepID=UPI0003C741DE
Putative ABC transport system, ATP-binding protein {ECO:0000313|EMBL:EPR76198.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubr
ABC transporter
SCNpilot_BF_INOC_scaffold_8018_7
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2459..3397)
DNA (939bp) protein (313aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Sinorhizobium meliloti Rm41 RepID=K0PI45_RHIML
polar amino acid ABC transporter inner membrane subunit
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ABR64219.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/En
SCNpilot_BF_INOC_scaffold_8018_8
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3492..4370)
DNA (879bp) protein (293aa)
Extracellular solute-binding protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HCE5_9RHIZ
Extracellular solute-binding protein {ECO:0000313|EMBL:EPE96309.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizo
extracellular solute-binding protein
SCNpilot_BF_INOC_scaffold_8018_9
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4567..5430
DNA (864bp) protein (288aa)
alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I2M2_9RHIZ
Alanine racemase {ECO:0000313|EMBL:EHK52777.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCN
SCNpilot_BF_INOC_scaffold_8018_10
Oceanibulbus indolifex, Oceanibulbus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5444..5629
DNA (186bp) protein (62aa)
Transcriptional regulator, LacI family protein {ECO:0000313|EMBL:EDQ03212.1}; TaxID=391624 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanibulbus.;" so
SCNpilot_BF_INOC_scaffold_8018_11
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5659..6192)
DNA (534bp) protein (178aa)
Sugar isomerase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FPN4_9RHIZ
Sugar isomerase {ECO:0000313|EMBL:ESX80877.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420
sugar isomerase (SIS)
SCNpilot_BF_INOC_scaffold_8018_12
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6679..7521
DNA (843bp) protein (281aa)
Ribokinase-like domain-containing protein n=1 Tax=Ochrobactrum intermedium M86 RepID=M5JPC5_9RHIZ
Ribokinase {ECO:0000313|EMBL:KFG70560.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
ribokinase-like domain-containing protein
SCNpilot_BF_INOC_scaffold_8018_13
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7539..8489
DNA (951bp) protein (317aa)
Ornithine cyclodeaminase/mu-crystallin n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I2M3_9RHIZ
Ornithine cyclodeaminase/mu-crystallin {ECO:0000313|EMBL:EHK52778.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Me
ornithine cyclodeaminase/mu-crystallin
SCNpilot_BF_INOC_scaffold_8018_14
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8739..8861
DNA (123bp) protein (41aa)
UPI0003CF910C related cluster n=1 Tax=unknown RepID=UPI0003CF910C
putative integrase/recombinase y4qK
Integrase {ECO:0000313|EMBL:KFL32590.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCNpilot_BF_INOC_scaffold_8018_15
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8839..9570
DNA (732bp) protein (244aa)
Integrase n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HH52_9RHIZ
Integrase {ECO:0000313|EMBL:KFL32590.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative integrase/recombinase y4qK
SCNpilot_BF_INOC_scaffold_8018_16
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9575..9694
DNA (120bp) protein (40aa)
transposase n=1 Tax=Rhizobium loti RepID=UPI00037A7E37
Transposase {ECO:0000313|EMBL:KFL32591.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
transposase
Displaying 16 items

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