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SCNpilot_BF_INOC_scaffold_855

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_855_1
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2..568)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Pseudomonas pelagia RepID=UPI0003B3A235
Uncharacterized protein {ECO:0000313|EMBL:KFC60589.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp.
hypothetical protein
SCNpilot_BF_INOC_scaffold_855_2
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(577..3879)
DNA (3303bp) protein (1101aa)
Conserved repeat domain protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y085_PEDHD
hypothetical protein
Conserved repeat domain protein {ECO:0000313|EMBL:ACU04797.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacte
SCNpilot_BF_INOC_scaffold_855_3
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4121..5182)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HZD9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ60927.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobac
Helix-turn-helix domain
SCNpilot_BF_INOC_scaffold_855_4
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5197..6180)
DNA (984bp) protein (328aa)
Transcriptional regulator, AraC family n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FYQ6_9SPHI
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEI91942.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" sour
DNA-binding domain-containing protein
SCNpilot_BF_INOC_scaffold_855_5
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6392..9400
DNA (3009bp) protein (1003aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B48FF0
Uncharacterized protein {ECO:0000313|EMBL:KGO79288.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium bei
uncharacterized protein
SCNpilot_BF_INOC_scaffold_855_6
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9406..10050)
DNA (645bp) protein (215aa)
LuxR family transcriptional regulator n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B644A8
Uncharacterized protein {ECO:0000313|EMBL:KGO79287.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium bei
transcriptional regulator
SCNpilot_BF_INOC_scaffold_855_7
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10539..10886
DNA (348bp) protein (116aa)
RRM domain-containing RNA-binding protein n=1 Tax=Flavobacterium sp. CF136 RepID=J3C0D9_9FLAO
RNA-binding protein {ECO:0000313|EMBL:KIX19687.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316
RNP-1 like RNA-binding protein
SCNpilot_BF_INOC_scaffold_855_8
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(10954..11631)
DNA (678bp) protein (226aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Pedobacter sp. BAL39 RepID=A6EC13_9SPHI
PAS sensor protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
PAS sensor protein
SCNpilot_BF_INOC_scaffold_855_9
unknown

Not on your lists

comp(11949..12422)
DNA (474bp) protein (158aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_855_10
unknown

Not on your lists

comp(12518..13006)
DNA (489bp) protein (163aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_855_11
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13089..13892)
DNA (804bp) protein (268aa)
Deoxyribonuclease gamma n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SDW9_9FLAO
Endonuclease {ECO:0000313|EMBL:KIA87723.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
Endonuclease/exonuclease/phosphatase precursor
SCNpilot_BF_INOC_scaffold_855_12
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13959..14855)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. F52 RepID=J1KNI2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJF99692.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp.
hypothetical protein
SCNpilot_BF_INOC_scaffold_855_13
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14860..16128)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J3BY97_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIA92718.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp.
hypothetical protein
SCNpilot_BF_INOC_scaffold_855_14
Flavobacterium sp. MEB061, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16132..16542)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J2S5R5_9FLAO
Contig_15, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ22398.1}; TaxID=1587524 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="F
hypothetical protein
SCNpilot_BF_INOC_scaffold_855_15
Flavobacterium columnare, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16566..17075)
DNA (510bp) protein (170aa)
SH3 type 3 domain-containing protein n=1 Tax=Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87) RepID=G8XA10_FLACA
SH3 type 3 domain-containing protein
SH3 type 3 domain-containing protein {ECO:0000313|EMBL:AEW85174.1}; TaxID=1041826 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavo
SCNpilot_BF_INOC_scaffold_855_16
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17062..18114)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XPU3_FLAIG
Restriction endonuclease or methylase {ECO:0000313|EMBL:KIA87724.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flav
hypothetical protein rbh
SCNpilot_BF_INOC_scaffold_855_17
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18258..18914)
DNA (657bp) protein (219aa)
transcriptional regulator n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002DC6D3B
Putative uncharacterized protein {ECO:0000313|EMBL:EIA10501.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobact
response regulator receiver protein
SCNpilot_BF_INOC_scaffold_855_18
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18926..20890)
DNA (1965bp) protein (655aa)
Putative signal transduction histidine kinase n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FU92_9FLAO
Putative signal transduction histidine kinase {ECO:0000313|EMBL:EIA08016.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" sour
signal transduction histidine kinase
SCNpilot_BF_INOC_scaffold_855_19
unknown

Not on your lists

comp(20936..21169)
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_855_20
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21505..22410
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B56D5C
Putative uncharacterized protein {ECO:0000313|EMBL:EIA08014.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobact
hypothetical protein
SCNpilot_BF_INOC_scaffold_855_21
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22453..22848)
DNA (396bp) protein (132aa)
Integrase catalytic region n=1 Tax=Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) RepID=E6X663_CELAD
Integrase {ECO:0000313|EMBL:KGO83519.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;
integrase
Displaying 21 items

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