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SCNpilot_BF_INOC_scaffold_1105

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1105_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31..834
DNA (804bp) protein (268aa)
cbbQ; Rubisco activation protein; K04748 nitric oxide reductase NorQ protein id=12494906 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
cbbQ; Rubisco activation protein; K04748 nitric oxide reductase NorQ protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
cbbQ; Rubisco activation protein
SCNpilot_BF_INOC_scaffold_1105_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

988..3330
DNA (2343bp) protein (781aa)
cbbO1; rubisco activation protein CbbO Tax=GWE1_Thiobacillus_62_9_curated
Rubisco activation protein CbbO id=1331602 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
cbbO1; rubisco activation protein CbbO
SCNpilot_BF_INOC_scaffold_1105_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3645..4469
DNA (825bp) protein (275aa)
spermidine synthase id=12494909 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
spermidine synthase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
spermidine synthase
SCNpilot_BF_INOC_scaffold_1105_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4505..4750
DNA (246bp) protein (82aa)
hypothetical protein id=12494910 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1105_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4760..5320)
DNA (561bp) protein (187aa)
NADH ubiquinone oxidoreductase 20 kDa subunit id=12494911 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
NADH ubiquinone oxidoreductase 20 kDa subunit Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
NADH ubiquinone oxidoreductase 20 kDa subunit
SCNpilot_BF_INOC_scaffold_1105_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5323..6864)
DNA (1542bp) protein (514aa)
NADH dehydrogenase (ubiquinone) 30 kDa subunit id=12494912 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
NADH dehydrogenase (ubiquinone) 30 kDa subunit Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
NADH dehydrogenase (ubiquinone) 30 kDa subunit
SCNpilot_BF_INOC_scaffold_1105_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6866..8317)
DNA (1452bp) protein (484aa)
NADH/ubiquinone/plastoquinone (EC:1.-.-.-) id=12494913 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
NADH/ubiquinone/plastoquinone (EC:1.-.-.-) Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
NADH/ubiquinone/plastoquinone (EC:1.-.-.-)
SCNpilot_BF_INOC_scaffold_1105_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8319..8981)
DNA (663bp) protein (221aa)
hyfE; hydrogenase 4 membrane component id=12494914 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hyfE; hydrogenase 4 membrane component Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hyfE; hydrogenase 4 membrane component
SCNpilot_BF_INOC_scaffold_1105_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8983..9930)
DNA (948bp) protein (316aa)
formate hydrogenlyase subunit 4 id=12494915 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
formate hydrogenlyase subunit 4 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
formate hydrogenlyase subunit 4
SCNpilot_BF_INOC_scaffold_1105_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9927..11939)
DNA (2013bp) protein (671aa)
NADH/ubiquinone/plastoquinone (complex I) id=12494916 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
NADH/ubiquinone/plastoquinone (complex I) Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
NADH/ubiquinone/plastoquinone (complex I)
SCNpilot_BF_INOC_scaffold_1105_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12038..12244
DNA (207bp) protein (69aa)
helix-turn-helix protein, CopG id=12494917 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
helix-turn-helix protein, CopG Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
helix-turn-helix protein, CopG
SCNpilot_BF_INOC_scaffold_1105_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12268..12828)
DNA (561bp) protein (187aa)
hypothetical protein id=12494918 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1105_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12926..14017)
DNA (1092bp) protein (364aa)
hypothetical protein; K07090 id=12494919 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein; K07090 Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1105_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14039..14365)
DNA (327bp) protein (109aa)
hypothetical protein id=12494920 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98565.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus d
SCNpilot_BF_INOC_scaffold_1105_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14505..15206
DNA (702bp) protein (234aa)
two component transcriptional regulator id=12494921 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
two component transcriptional regulator Tax=GWE1_Thiobacillus_62_9_curated
two component transcriptional regulator
SCNpilot_BF_INOC_scaffold_1105_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15196..16461
DNA (1266bp) protein (422aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales
periplasmic sensor signal transduction histidine kinase id=12494922 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
periplasmic sensor signal transduction histidine kinase
SCNpilot_BF_INOC_scaffold_1105_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16492..16866)
DNA (375bp) protein (125aa)
high affinity sulfate transporter SulP id=12494923 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
high affinity sulfate transporter SulP Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
sulP; sulfate transporter
Displaying 17 items

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