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SCNpilot_BF_INOC_scaffold_1611

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Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1611_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..180
DNA (180bp) protein (60aa)
L-glutamine synthetase (EC:6.3.1.2); K01915 glutamine synthetase [EC:6.3.1.2] id=12494771 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
L-glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophila
SCNpilot_BF_INOC_scaffold_1611_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

296..766
DNA (471bp) protein (157aa)
hypothetical protein id=12494770 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1611_3
GWE2_Gallionellales_58_10_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(873..1418)
DNA (546bp) protein (182aa)
hypothetical protein Tax=GWE2_Gallionellales_58_10_curated
SCNpilot_BF_INOC_scaffold_1611_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1898..3328
DNA (1431bp) protein (477aa)
two component Fis family transcriptional regulator; K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG id=12494767 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
two component Fis family transcriptional regulator; K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG Tax=GWE1_Thiobacillus_62_9_curated
Fis family transcriptional regulator
SCNpilot_BF_INOC_scaffold_1611_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3393..3713)
DNA (321bp) protein (107aa)
glutaredoxin-like protein; K07390 monothiol glutaredoxin id=12494766 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
glutaredoxin-like protein; K07390 monothiol glutaredoxin Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
glutaredoxin-like protein
SCNpilot_BF_INOC_scaffold_1611_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3776..4804)
DNA (1029bp) protein (343aa)
hypothetical protein id=12494765 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1611_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4879..5799)
DNA (921bp) protein (307aa)
Hpr(Ser) kinase/phosphatase (EC:2.7.1.-); K00924 [EC:2.7.1.-] id=12494764 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Hpr(Ser) kinase/phosphatase (EC:2.7.1.-); K00924 [EC:2.7.1.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Hpr(Ser) kinase/phosphatase (EC:2.7.1.-)
SCNpilot_BF_INOC_scaffold_1611_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5796..6008)
DNA (213bp) protein (71aa)
hypothetical protein id=12494763 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_BF_INOC_scaffold_1611_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6089..6751)
DNA (663bp) protein (221aa)
hypothetical protein id=12494762 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1611_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6895..7764)
DNA (870bp) protein (290aa)
modification methylase HemK; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] id=12494761 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
modification methylase HemK; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] Tax=GWE1_Thiobacillus_62_9_curated
modification methylase HemK
SCNpilot_BF_INOC_scaffold_1611_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7761..8843)
DNA (1083bp) protein (361aa)
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1 id=12494760 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1 Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
prfA; peptide chain release factor 1
SCNpilot_BF_INOC_scaffold_1611_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8840..10090)
DNA (1251bp) protein (417aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70); K02492 glutamyl-tRNA reductase [EC:1.2.1.70] id=12494759 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hemA; glutamyl-tRNA reductase (EC:1.2.1.70); K02492 glutamyl-tRNA reductase [EC:1.2.1.70] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
SCNpilot_BF_INOC_scaffold_1611_13
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10140..11051)
DNA (912bp) protein (304aa)
hypothetical protein id=12494758 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98444.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus d
SCNpilot_BF_INOC_scaffold_1611_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11060..11680)
DNA (621bp) protein (207aa)
hypothetical protein id=12494757 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98443.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus d
SCNpilot_BF_INOC_scaffold_1611_15
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11683..12531)
DNA (849bp) protein (283aa)
3-mercaptopyruvate sulfurtransferase (EC:2.8.1.2); K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] id=12494756 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
3-mercaptopyruvate sulfurtransferase (EC:2.8.1.2)
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denit
SCNpilot_BF_INOC_scaffold_1611_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12614..12946)
DNA (333bp) protein (111aa)
putative sulfite reductase gamma chain id=12494755 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
sulfite reductase gamma chain
Putative sulfite reductase gamma chain {ECO:0000313|EMBL:AAZ98441.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source=
SCNpilot_BF_INOC_scaffold_1611_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13002..13658)
DNA (657bp) protein (219aa)
hypothetical protein id=12494754 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1611_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13655..13876)
DNA (222bp) protein (74aa)
hypothetical protein id=12494753 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1611_19
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14316..15620
DNA (1305bp) protein (435aa)
sulfite reductase, dissimilatory-type subunit alpha (EC:1.8.99.3); K11180 sulfite reductase, dissimilatory-type alpha subunit [EC:1.8.99.3] id=12494752 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
sulfite reductase, dissimilatory-type subunit alpha (EC:1.8.99.3); K11180 sulfite reductase, dissimilatory-type alpha subunit [EC:1.8.99.3] Tax=RBG_16_Gallionellales_57_15_curated
sulfite reductase, dissimilatory-type subunit alpha (EC:1.8.99.3)
SCNpilot_BF_INOC_scaffold_1611_20
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15686..16756
DNA (1071bp) protein (357aa)
sulfite reductase, dissimilatory-type subunit beta (EC:1.8.99.3); K11181 sulfite reductase, dissimilatory-type beta subunit [EC:1.8.99.3] id=12494751 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
sulfite reductase, dissimilatory-type subunit beta (EC:1.8.99.3); K11181 sulfite reductase, dissimilatory-type beta subunit [EC:1.8.99.3] Tax=RBG_16_Gallionellales_57_15_curated
sulfite reductase, dissimilatory-type subunit beta (EC:1.8.99.3)
SCNpilot_BF_INOC_scaffold_1611_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16845..17204
DNA (360bp) protein (120aa)
DsrE protein; K07235 tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] id=12494750 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
DsrE protein; K07235 tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
DsrE protein
SCNpilot_BF_INOC_scaffold_1611_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17216..17611
DNA (396bp) protein (132aa)
DsrF protein; K07236 tRNA 2-thiouridine synthesizing protein C id=12494749 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
DsrF protein; K07236 tRNA 2-thiouridine synthesizing protein C Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
DsrF protein
SCNpilot_BF_INOC_scaffold_1611_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17622..17921
DNA (300bp) protein (100aa)
DsrH protein; K07237 tRNA 2-thiouridine synthesizing protein B id=12494748 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
DsrH protein; K07237 tRNA 2-thiouridine synthesizing protein B Tax=GWE1_Thiobacillus_62_9_curated
DsrH protein
SCNpilot_BF_INOC_scaffold_1611_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17945..18280
DNA (336bp) protein (112aa)
putative sulfite reductase; K11179 tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] id=12494747 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative sulfite reductase; K11179 tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
sulfite reductase
SCNpilot_BF_INOC_scaffold_1611_25
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18434..19168
DNA (735bp) protein (245aa)
putative DsrM protein id=12494746 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative DsrM protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
DsrM protein
SCNpilot_BF_INOC_scaffold_1611_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19218..20702
DNA (1485bp) protein (495aa)
reductase, iron-sulfur binding subunit id=12494745 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
reductase, iron-sulfur binding subunit Tax=GWE1_Thiobacillus_62_9_curated
reductase, iron-sulfur binding subunit
SCNpilot_BF_INOC_scaffold_1611_27
RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20720..22231)
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Amphimedon queenslandica RepID=I1EKZ8_AMPQE
Uncharacterized protein Tax=RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated
SCNpilot_BF_INOC_scaffold_1611_28
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22471..22665
DNA (195bp) protein (65aa)
putative glutamate synthase (NADPH) small subunit id=12494744 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
glutamate synthase (NADPH) small subunit
Iron-sulfur cluster-binding protein, GltD family {ECO:0000313|EMBL:AAZ98430.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.
SCNpilot_BF_INOC_scaffold_1611_29
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22683..23168
DNA (486bp) protein (162aa)
hypothetical protein id=12494743 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1611_30
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23165..23941
DNA (777bp) protein (259aa)
iron-sulfur cluster protein; K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-] id=12494742 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
iron-sulfur cluster protein; K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
iron-sulfur cluster protein
Displaying items 1-30 of 37 in total

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