ggKbase home page

SCNpilot_BF_INOC_scaffold_1984

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1984_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..315
DNA (315bp) protein (105aa)
6-pyruvoyl tetrahydrobiopterin synthase; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] id=12493611 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
6-pyruvoyl tetrahydrobiopterin synthase; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
6-pyruvoyl tetrahydrobiopterin synthase
SCNpilot_BF_INOC_scaffold_1984_2
RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(233..1024)
DNA (792bp) protein (264aa)
hypothetical protein Tax=RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated
SCNpilot_BF_INOC_scaffold_1984_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1204..1845
DNA (642bp) protein (214aa)
putative metallo-beta-lactamase family protein id=12493613 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
metallo-beta-lactamase
Putative metallo-beta-lactamase family protein {ECO:0000313|EMBL:AAZ98691.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;"
SCNpilot_BF_INOC_scaffold_1984_4

Not on your lists

comp(1829..2947)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AHL4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD61236.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_BF_INOC_scaffold_1984_5
RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3180..3698)
DNA (519bp) protein (173aa)
hypothetical protein Tax=RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated
SCNpilot_BF_INOC_scaffold_1984_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3869..4189
DNA (321bp) protein (107aa)
hypothetical protein id=12493616 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1984_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4263..4904
DNA (642bp) protein (214aa)
type 11 methyltransferase id=12493617 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
methyltransferase, putative Tax=GWE1_Thiobacillus_62_9_curated
type 11 methyltransferase
SCNpilot_BF_INOC_scaffold_1984_8
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4971..5993)
DNA (1023bp) protein (341aa)
hypothetical protein id=12493618 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN35804.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella deni
SCNpilot_BF_INOC_scaffold_1984_9
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6112..6522
DNA (411bp) protein (137aa)
GreA/GreB family elongation factor; K06140 regulator of nucleoside diphosphate kinase id=12493619 bin=THIO_HI species=Nitrococcus mobilis genus=Nitrococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Nucleoside diphosphate kinase regulator {ECO:0000313|EMBL:AKH20089.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
GreA/GreB family elongation factor
SCNpilot_BF_INOC_scaffold_1984_10
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6692..8416
DNA (1725bp) protein (575aa)
ABC transporter permease; K02050 NitT/TauT family transport system permease protein id=12493620 bin=THIO_HI species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=THIO_HI organism_group=Betaproteobacteria
ABC transporter permease; K02050 NitT/TauT family transport system permease protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
ABC transporter permease
SCNpilot_BF_INOC_scaffold_1984_11
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

8422..9708
DNA (1287bp) protein (429aa)
putative ABC transporter ATP-binding protein; K02049 NitT/TauT family transport system ATP-binding protein id=12493621 bin=THIO_HI species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=THIO_HI organism_group=Betaproteobacteria
putative ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAJ62792.1}; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolin
SCNpilot_BF_INOC_scaffold_1984_12
Dinoroseobacter shibae, Dinoroseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9787..10686
DNA (900bp) protein (300aa)
uspA2; universal stress protein uspA id=12493622 bin=THIO_HI species=Dinoroseobacter shibae genus=Dinoroseobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
uspA2; universal stress protein uspA
Universal stress protein uspA {ECO:0000313|EMBL:ABV92167.1}; TaxID=398580 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Dinoroseobacter.;" source="Dinorose
SCNpilot_BF_INOC_scaffold_1984_13
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10723..12429)
DNA (1707bp) protein (569aa)
ybjI_[C]; HAD-superfamily hydrolase, subfamily IIB id=12493623 bin=THIO_HI species=Thioalkalivibrio sp. ALJ2 genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ybjI_[C]; HAD-superfamily hydrolase, subfamily IIB
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:AGA34542.1}; TaxID=1255043 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;"
SCNpilot_BF_INOC_scaffold_1984_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12702..12956)
DNA (255bp) protein (85aa)
cell division topological specificity factor MinE; K03608 cell division topological specificity factor id=12493624 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
cell division topological specificity factor MinE
Cell division topological specificity factor {ECO:0000255|HAMAP-Rule:MF_00262}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.
SCNpilot_BF_INOC_scaffold_1984_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12958..13608)
DNA (651bp) protein (217aa)
septum site-determining protein MinD; K03609 septum site-determining protein MinD id=12493625 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
septum site-determining protein MinD; K03609 septum site-determining protein MinD Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
septum site-determining protein MinD
SCNpilot_BF_INOC_scaffold_1984_16
unknown

Not on your lists

13926..14159
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_1984_17
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14966..16216
DNA (1251bp) protein (417aa)
hypothetical protein id=12493627 bin=THIO_HI species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=GWA2_Curvibacter_64_110_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1984_18
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16213..18255
DNA (2043bp) protein (681aa)
Uncharacterized protein n=1 Tax=Prosthecochloris aestuarii (strain DSM 271 / SK 413) RepID=B4S4B9_PROA2
hypothetical protein; K06915 Tax=GWA2_Curvibacter_64_110_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1984_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18849..19346
DNA (498bp) protein (166aa)
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
SCNpilot_BF_INOC_scaffold_1984_20
Dickeya dadantii, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19368..19457)
DNA (90bp) protein (30aa)
Nitrate ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ACS86275.1}; TaxID=579405 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" so
Displaying 20 items

View Taxonomy