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SCNpilot_BF_INOC_scaffold_1998

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_1998_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17..1438)
DNA (1422bp) protein (474aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22); K16011 mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] id=12493985 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22); K16011 mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_cu
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22)
SCNpilot_BF_INOC_scaffold_1998_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1553..2422)
DNA (870bp) protein (290aa)
hypothetical protein id=12493984 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1998_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2644..3243)
DNA (600bp) protein (200aa)
hypothetical protein id=12493983 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1998_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3412..5664)
DNA (2253bp) protein (751aa)
ATP-dependent Clp protease ATP-binding subunit ClpA (EC:3.4.21.92); K03694 ATP-dependent Clp protease ATP-binding subunit ClpA Tax=GWE1_Thiobacillus_62_9_curated
ATP-dependent Clp protease ATP-binding subunit ClpA (EC:3.4.21.92)
ATP-dependent Clp protease ATP-binding protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036A21ED
SCNpilot_BF_INOC_scaffold_1998_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5665..5973)
DNA (309bp) protein (103aa)
ATP-dependent Clp protease adaptor protein ClpS; K06891 ATP-dependent Clp protease adaptor protein ClpS id=12495339 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ATP-dependent Clp protease adaptor protein ClpS; K06891 ATP-dependent Clp protease adaptor protein ClpS Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ATP-dependent Clp protease adaptor protein ClpS
SCNpilot_BF_INOC_scaffold_1998_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6528..7181)
DNA (654bp) protein (218aa)
signal transduction histidine kinase id=12495341 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
signal transduction histidine kinase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
signal transduction histidine kinase
SCNpilot_BF_INOC_scaffold_1998_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7178..8836)
DNA (1659bp) protein (553aa)
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains id=12495342 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
SCNpilot_BF_INOC_scaffold_1998_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8963..9829)
DNA (867bp) protein (289aa)
ATP-binding ABC transporter protein; K02065 putative ABC transport system ATP-binding protein id=12495343 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ATP-binding ABC transporter protein; K02065 putative ABC transport system ATP-binding protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ATP-binding ABC transporter protein
SCNpilot_BF_INOC_scaffold_1998_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9853..10938)
DNA (1086bp) protein (362aa)
2-oxoglutarate dehydrogenase E2 component (EC:2.3.1.61); K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33
2-oxoglutarate dehydrogenase E2 (EC:2.3.1.61)
dihydrolipoamide succinyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI0003823152
SCNpilot_BF_INOC_scaffold_1998_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10928..13624)
DNA (2697bp) protein (899aa)
sucA; 2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2); K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] id=12495345 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
sucA; 2-oxoglutarate dehydrogenase E1 (EC:1.2.4.2)
2-oxoglutarate dehydrogenase, E1 component {ECO:0000313|EMBL:AAZ97141.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sou
SCNpilot_BF_INOC_scaffold_1998_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13647..14942)
DNA (1296bp) protein (432aa)
citrate synthase (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] id=12495346 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
citrate synthase (EC:2.3.3.1)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydro
SCNpilot_BF_INOC_scaffold_1998_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14939..15181)
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D0C89
hypothetical protein; K09159 hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_1998_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15324..16019)
DNA (696bp) protein (232aa)
succinate dehydrogenase subunit B (EC:1.3.5.1); K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1] id=12495347 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
succinate dehydrogenase subunit B (EC:1.3.5.1); K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
succinate dehydrogenase subunit B (EC:1.3.5.1)
SCNpilot_BF_INOC_scaffold_1998_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16019..16228)
DNA (210bp) protein (70aa)
succinate dehydrogenase subunit A (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] id=12495348 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
succinate dehydrogenase subunit A (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
succinate dehydrogenase subunit A (EC:1.3.5.1)
SCNpilot_BF_INOC_scaffold_1998_15
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16560..17852
DNA (1293bp) protein (431aa)
hypothetical protein n=1 Tax=Burkholderia thailandensis RepID=UPI00016A307F
Uncharacterized protein {ECO:0000313|EMBL:CDL21877.1}; TaxID=1432554 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pne
hypothetical protein
SCNpilot_BF_INOC_scaffold_1998_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17747..18091)
DNA (345bp) protein (115aa)
succinate dehydrogenase subunit D (EC:1.3.5.1); K00242 succinate dehydrogenase membrane anchor subunit id=12495349 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
succinate dehydrogenase subunit D (EC:1.3.5.1); K00242 succinate dehydrogenase membrane anchor subunit Tax=GWE1_Thiobacillus_62_9_curated
succinate dehydrogenase subunit D (EC:1.3.5.1)
SCNpilot_BF_INOC_scaffold_1998_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18088..18468)
DNA (381bp) protein (127aa)
succinate dehydrogenase subunit C (EC:1.3.5.1); K00241 succinate dehydrogenase cytochrome b556 subunit id=12495350 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
succinate dehydrogenase subunit C (EC:1.3.5.1); K00241 succinate dehydrogenase cytochrome b556 subunit Tax=GWE1_Thiobacillus_62_9_curated
succinate dehydrogenase subunit C (EC:1.3.5.1)
SCNpilot_BF_INOC_scaffold_1998_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18494..18724)
DNA (231bp) protein (77aa)
malate dehydrogenase (EC:1.1.1.40); K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] id=12495351 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
malate dehydrogenase (EC:1.1.1.40); K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
malate dehydrogenase (EC:1.1.1.40)
Displaying 18 items

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