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SCNpilot_BF_INOC_scaffold_2243

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2243_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..829
DNA (828bp) protein (276aa)
histidinol-phosphate aminotransferase (EC:2.6.1.9); K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] id=12493551 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
histidinol-phosphate aminotransferase (EC:2.6.1.9); K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] Tax=GWE1_Thiobacillus_62_9_curated
histidinol-phosphate aminotransferase (EC:2.6.1.9)
SCNpilot_BF_INOC_scaffold_2243_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

859..1395
DNA (537bp) protein (179aa)
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] id=12493550 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] Tax=GWE1_Thiobacillus_62_9_curated
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
SCNpilot_BF_INOC_scaffold_2243_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1392..2078
DNA (687bp) protein (229aa)
imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-); K02501 glutamine amidotransferase [EC:2.4.2.-] id=12493549 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-); K02501 glutamine amidotransferase [EC:2.4.2.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-)
SCNpilot_BF_INOC_scaffold_2243_4
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2110..2865
DNA (756bp) protein (252aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16); K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] id=12493548 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000255|HAMAP-Rule:MF_01014}; EC=5.3.1.16 {ECO:0000255|HAMAP-Rule:MF_01014};; Phosphoribosylform
SCNpilot_BF_INOC_scaffold_2243_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2881..3636
DNA (756bp) protein (252aa)
imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-); K02500 cyclase [EC:4.1.3.-] id=12493547 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-); K02500 cyclase [EC:4.1.3.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-)
SCNpilot_BF_INOC_scaffold_2243_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3633..4049
DNA (417bp) protein (139aa)
phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19); K01496 phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] id=12493546 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19); K01496 phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
SCNpilot_BF_INOC_scaffold_2243_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4046..4363
DNA (318bp) protein (106aa)
hisE; phosphoribosyl-ATP pyrophosphatase (EC:3.6.1.31); K01523 phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] id=12493545 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hisE; phosphoribosyl-ATP pyrophosphatase (EC:3.6.1.31); K01523 phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] Tax=GWE1_Thiobacillus_62_9_curated
hisE; phosphoribosyl-ATP pyrophosphatase (EC:3.6.1.31)
SCNpilot_BF_INOC_scaffold_2243_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4356..4700
DNA (345bp) protein (115aa)
HIT family protein; K02503 Hit-like protein involved in cell-cycle regulation id=12493544 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
HIT family protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
HIT family protein
SCNpilot_BF_INOC_scaffold_2243_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4713..4925
DNA (213bp) protein (71aa)
tatA; twin arginine translocase protein A; K03116 sec-independent protein translocase protein TatA id=12493543 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
tatA; twin arginine translocase protein A; K03116 sec-independent protein translocase protein TatA Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
tatA; twin-arginine translocation protein TatA
SCNpilot_BF_INOC_scaffold_2243_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5004..5486
DNA (483bp) protein (161aa)
twin-arginine translocation protein TatB; K03117 sec-independent protein translocase protein TatB id=12493542 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
twin-arginine translocation protein TatB; K03117 sec-independent protein translocase protein TatB Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
twin-arginine translocation protein TatB
SCNpilot_BF_INOC_scaffold_2243_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5483..6307
DNA (825bp) protein (275aa)
Sec-independent protein translocase TatC; K03118 sec-independent protein translocase protein TatC id=12493541 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Sec-independent protein translocase TatC; K03118 sec-independent protein translocase protein TatC Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Sec-independent protein translocase TatC
SCNpilot_BF_INOC_scaffold_2243_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6457..7659
DNA (1203bp) protein (401aa)
putative ammonium transporter id=12493540 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative ammonium transporter Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ammonium transporter
SCNpilot_BF_INOC_scaffold_2243_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7649..8932)
DNA (1284bp) protein (428aa)
Serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] id=12493539 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Serine/threonine protein kinase
SCNpilot_BF_INOC_scaffold_2243_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8943..9686)
DNA (744bp) protein (248aa)
oxidoreductase id=12493538 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
oxidoreductase Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
oxidoreductase
SCNpilot_BF_INOC_scaffold_2243_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9683..10408)
DNA (726bp) protein (242aa)
putative squalene/phytoene dehydrogenase id=12493537 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative squalene/phytoene dehydrogenase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
squalene/phytoene dehydrogenase
SCNpilot_BF_INOC_scaffold_2243_16
unknown

Not on your lists

10674..11021
DNA (348bp) protein (116aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2243_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10904..11365)
DNA (462bp) protein (154aa)
farnesyl-diphosphate farnesyltransferase (EC:2.5.1.21); K02291 phytoene synthase [EC:2.5.1.32] id=12493536 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
farnesyl-diphosphate farnesyltransferase (EC:2.5.1.21)
farnesyl-diphosphate farnesyltransferase (EC:2.5.1.21); K02291 phytoene synthase [EC:2.5.1.32] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 17 items

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