ggKbase home page

SCNpilot_BF_INOC_scaffold_2313

Search features with annotation key words

Displaying 15 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2313_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1085
DNA (1083bp) protein (361aa)
thiol:disulfide interchange protein DsbD (EC:1.8.1.8); K04084 thiol:disulfide interchange protein DsbD [EC:1.8.1.8] id=12495270 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
thiol:disulfide interchange protein DsbD (EC:1.8.1.8); K04084 thiol:disulfide interchange protein DsbD [EC:1.8.1.8] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
thiol:disulfide interchange protein DsbD (EC:1.8.1.8)
SCNpilot_BF_INOC_scaffold_2313_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1138..2205)
DNA (1068bp) protein (356aa)
hypothetical protein id=12495271 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2313_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2320..3240)
DNA (921bp) protein (307aa)
glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8); K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] id=12495272 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000255|HAMAP-Rule:MF_00375}; Short=GSA {ECO:0000255|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000255|HAMAP-Rule:MF_00375};; Glutamate-1-semialdehyde aminot
SCNpilot_BF_INOC_scaffold_2313_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3571..4206)
DNA (636bp) protein (212aa)
thiamine monophosphate synthase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] id=12495273 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
thiamine monophosphate synthase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
thiamine monophosphate synthase (EC:2.5.1.3)
SCNpilot_BF_INOC_scaffold_2313_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4215..5057)
DNA (843bp) protein (281aa)
phosphomethylpyrimidine kinase; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] id=12495274 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
phosphomethylpyrimidine kinase; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] Tax=GWE1_Thiobacillus_62_9_curated
phosphomethylpyrimidine kinase
SCNpilot_BF_INOC_scaffold_2313_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5111..5293
DNA (183bp) protein (61aa)
Rubredoxin id=12495275 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
rubredoxin protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Rubredoxin
SCNpilot_BF_INOC_scaffold_2313_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5430..6338
DNA (909bp) protein (303aa)
hypothetical protein id=12495276 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2313_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6448..6900
DNA (453bp) protein (151aa)
response regulator receiver domain-containing protein; K02657 twitching motility two-component system response regulator PilG id=12495277 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
response regulator receiver domain-containing protein; K02657 twitching motility two-component system response regulator PilG Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
response regulator receiver domain-containing protein
SCNpilot_BF_INOC_scaffold_2313_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6919..7284
DNA (366bp) protein (122aa)
response regulator receiver domain-containing protein; K02658 twitching motility two-component system response regulator PilH id=12495278 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
response regulator receiver domain-containing protein; K02658 twitching motility two-component system response regulator PilH Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
response regulator receiver domain-containing protein
SCNpilot_BF_INOC_scaffold_2313_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7295..7804
DNA (510bp) protein (170aa)
CheW protein; K02659 twitching motility protein PilI id=12495279 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
CheW protein; K02659 twitching motility protein PilI Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
chemotaxis protein CheW
SCNpilot_BF_INOC_scaffold_2313_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7871..9979
DNA (2109bp) protein (703aa)
chemotaxis sensory transducer; K02660 twitching motility protein PilJ id=12495280 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Chemotaxis sensory transducer {ECO:0000313|EMBL:AAZ98502.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobaci
chemotaxis sensory transducer
SCNpilot_BF_INOC_scaffold_2313_12
unknown

Not on your lists

comp(10053..11501)
DNA (1449bp) protein (483aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2313_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12153..16037
DNA (3885bp) protein (1295aa)
signal transduction histidine kinase CheA-like protein; K02487 type IV pili sensor histidine kinase and response regulator; K06596 chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) id=12495282 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
signal transduction histidine kinase CheA-like protein; K02487 type IV pili sensor histidine kinase and response regulator; K06596 chemosensory pili system protein ChpA (sensor histidine kinase/respon
signal transduction histidine kinase CheA-like protein
SCNpilot_BF_INOC_scaffold_2313_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16099..17151)
DNA (1053bp) protein (351aa)
hypothetical protein id=12495283 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2313_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17273..19105)
DNA (1833bp) protein (611aa)
hypothetical protein id=12495284 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
Displaying 15 items

View Taxonomy