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SCNpilot_BF_INOC_scaffold_2530

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2530_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(125..1282)
DNA (1158bp) protein (386aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000377D092
serine-type D-Ala-D-Ala carboxypeptidase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_BF_INOC_scaffold_2530_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1498..2451
DNA (954bp) protein (318aa)
dihydroorotate dehydrogenase 2 (EC:1.3.3.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
dihydroorotate dehydrogenase 2 (EC:1.3.3.1)
dihydroorotate dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI000371B737
SCNpilot_BF_INOC_scaffold_2530_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2457..3704
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035C5841
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2530_4
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3772..4854
DNA (1083bp) protein (361aa)
L-alanine dehydrogenase (EC:1.4.1.1)
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophil
alanine dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI00036495D6
SCNpilot_BF_INOC_scaffold_2530_5
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5077..5859
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000370B854
predicted transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:BAO81056.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacter
SCNpilot_BF_INOC_scaffold_2530_6
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6029..8683
DNA (2655bp) protein (885aa)
Predicted helicase {ECO:0000313|EMBL:BAO81055.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;"
predicted helicase
CRISPR-associated helicase Cas3; K07012 id=12496798 bin=THIO_MID species=Lamprocystis purpurea genus=Lamprocystis taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
SCNpilot_BF_INOC_scaffold_2530_7
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8670..10214
DNA (1545bp) protein (515aa)
Cse1 family CRISPR-associated protein id=12496797 bin=THIO_MID species=Lamprocystis purpurea genus=Lamprocystis taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
cse1; CRISPR/Cas system-associated protein Cse1
CRISPR/Cas system-associated protein Cse1 {ECO:0000313|EMBL:BAO81054.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae
SCNpilot_BF_INOC_scaffold_2530_8
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10211..10669
DNA (459bp) protein (153aa)
Cse2 family CRISPR-associated protein Tax=RBG_16_Gallionellales_56_9_curated
hypothetical protein
Cse2 family CRISPR-associated protein id=12496796 bin=THIO_MID species=unknown genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
SCNpilot_BF_INOC_scaffold_2530_9
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10669..11928
DNA (1260bp) protein (420aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00037C4211
cas7; CRISPR/Cas system-associated RAMP superfamily protein Cas7
CRISPR/Cas system-associated RAMP superfamily protein Cas7 {ECO:0000313|EMBL:BAO81052.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source
SCNpilot_BF_INOC_scaffold_2530_10
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11933..12607
DNA (675bp) protein (225aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO81051.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;"
Cas5 family CRISPR-associated protein id=12496794 bin=THIO_MID species=Lamprocystis purpurea genus=Lamprocystis taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
SCNpilot_BF_INOC_scaffold_2530_11
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12598..13224
DNA (627bp) protein (209aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO81050.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;"
Cse3 family CRISPR-associated protein id=12496793 bin=THIO_MID species=Lamprocystis purpurea genus=Lamprocystis taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Displaying 11 items

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