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SCNpilot_BF_INOC_scaffold_2779

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_2779_1
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1011)
DNA (1011bp) protein (337aa)
ABC transporter permease and ATP-binding protein; K06147 ATP-binding cassette, subfamily B, bacterial id=12494702 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ABC transporter transmembrane region
Tax=BJP_IG2103_Rhodocyclales_63_50
SCNpilot_BF_INOC_scaffold_2779_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1058..1339)
DNA (282bp) protein (94aa)
Patatin; K07001 NTE family protein id=12494701 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
patatin; K07001 NTE family protein Tax=GWE1_Thiobacillus_62_9_curated
patatin
SCNpilot_BF_INOC_scaffold_2779_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2165..2761
DNA (597bp) protein (199aa)
OmpA/MotB domain containing protein id=12494700 bin=THIO_HI species=Pseudogulbenkiania ferrooxidans genus=Pseudogulbenkiania taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
OmpA/MotB domain containing protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
OmpA/MotB domain containing protein
SCNpilot_BF_INOC_scaffold_2779_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2870..3367)
DNA (498bp) protein (166aa)
conserved hypothethical protein, Phosphatidylethanolamine-binding protein family, UPF0098 id=12494699 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
conserved hypothethical protein, Phosphatidylethanolamine-binding protein family, UPF0098 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
conserved hypothethical protein, Phosphatidylethanolamine-binding protein family, UPF0098
SCNpilot_BF_INOC_scaffold_2779_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3461..4129)
DNA (669bp) protein (223aa)
hypothetical protein; K09915 hypothetical protein id=12494698 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein; K09915 hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2779_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4278..4769
DNA (492bp) protein (164aa)
putative Signal transduction histidine kinase id=12494697 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
putative Signal transduction histidine kinase
SCNpilot_BF_INOC_scaffold_2779_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4786..5352)
DNA (567bp) protein (189aa)
hypothetical protein id=12494696 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2779_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5549..5923
DNA (375bp) protein (125aa)
transmembrane protein id=12494695 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
transmembrane protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
transmembrane protein
SCNpilot_BF_INOC_scaffold_2779_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5907..6410
DNA (504bp) protein (168aa)
id=12494694 bin=THIO_HI tax=THIO_HI organism_group=Betaproteobacteria
sigma-24 (FecI); K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWE1_Thiobacillus_62_9_curated
sigma-24 (FecI)
SCNpilot_BF_INOC_scaffold_2779_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6407..7165
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035E9D15
transmembrane transcriptional regulator (anti-sigma factor)
Predicted transmembrane transcriptional regulator (Anti-sigma factor) {ECO:0000313|EMBL:AAZ97606.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophi
SCNpilot_BF_INOC_scaffold_2779_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7315..8214
DNA (900bp) protein (300aa)
hypothetical protein id=12494101 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2779_12
unknown

Not on your lists

comp(8168..9184)
DNA (1017bp) protein (339aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_2779_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9524..10279
DNA (756bp) protein (252aa)
ABC transporter permease; K02066 putative ABC transport system permease protein id=12494103 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ABC transporter permease; K02066 putative ABC transport system permease protein Tax=GWE1_Thiobacillus_62_9_curated
ABC transporter permease
SCNpilot_BF_INOC_scaffold_2779_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10279..11067
DNA (789bp) protein (263aa)
ABC transporter ATP-binding protein; K02065 putative ABC transport system ATP-binding protein id=12494104 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ABC transporter ATP-binding protein; K02065 putative ABC transport system ATP-binding protein Tax=GWE1_Thiobacillus_62_9_curated
ABC transporter ATP-binding protein
SCNpilot_BF_INOC_scaffold_2779_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11057..12004
DNA (948bp) protein (316aa)
ABC-type transport system periplasmic component; K02067 putative ABC transport system substrate-binding protein id=12494105 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ABC-type transport system periplasmic component; K02067 putative ABC transport system substrate-binding protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ABC-type transport system periplasmic component
SCNpilot_BF_INOC_scaffold_2779_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12001..12603
DNA (603bp) protein (201aa)
putative lipoprotein id=12494106 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative lipoprotein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
lipoprotein
SCNpilot_BF_INOC_scaffold_2779_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12652..13080
DNA (429bp) protein (143aa)
hypothetical protein id=12494107 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2779_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13138..13818)
DNA (681bp) protein (227aa)
hypothetical protein; K09792 hypothetical protein id=12494108 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein; K09792 hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2779_19
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13985..14302)
DNA (318bp) protein (106aa)
hypothetical protein id=12494109 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_2779_20
Thiobacillus sp. SCN1, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14312..14527)
DNA (216bp) protein (72aa)
hypothetical protein id=12494110 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein id=12494110 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
SCNpilot_BF_INOC_scaffold_2779_21
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14545..15900)
DNA (1356bp) protein (452aa)
putative transport transmembrane protein; K08218 MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG id=12494111 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
transport transmembrane protein
Putative transport transmembrane protein {ECO:0000313|EMBL:AAZ96206.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Th
SCNpilot_BF_INOC_scaffold_2779_22
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15924..16262)
DNA (339bp) protein (113aa)
Death on curing protein, putative; K07341 death on curing protein id=12494112 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Death on curing protein, putative; K07341 death on curing protein Tax=RBG_16_Gallionellales_57_15_curated
death-on-curing family protein
Displaying 22 items

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