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SCNpilot_BF_INOC_scaffold_3185

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_3185_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..920)
DNA (918bp) protein (306aa)
extracellular solute-binding protein id=12495575 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
extracellular solute-binding protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
extracellular solute-binding protein
SCNpilot_BF_INOC_scaffold_3185_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1146..1373)
DNA (228bp) protein (76aa)
hypothetical protein id=12495576 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3185_3
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1563..2447
DNA (885bp) protein (295aa)
hypothetical protein id=12495577 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN34544.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella deni
SCNpilot_BF_INOC_scaffold_3185_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2460..2663)
DNA (204bp) protein (68aa)
hypothetical protein id=12495578 bin=THIO_HI species=Thiocystis violascens genus=Thiocystis taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3185_5
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3006..3974
DNA (969bp) protein (323aa)
VacJ-like lipoprotein; K04754 lipoprotein id=12495579 bin=THIO_HI species=unknown genus=unknown taxon_order=unknown taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
VacJ family lipoprotein; K04754 lipoprotein Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
VacJ-like lipoprotein
SCNpilot_BF_INOC_scaffold_3185_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4317..4892)
DNA (576bp) protein (192aa)
ErfK/YbiS/YcfS/YnhG family protein id=12495580 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ErfK/YbiS/YcfS/YnhG family protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ErfK/YbiS/YcfS/YnhG family protein
SCNpilot_BF_INOC_scaffold_3185_7
BJP_IG2158_Methylococcales_50_91, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5371..5943
DNA (573bp) protein (191aa)
hypothetical protein id=12495581 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=BJP_IG2158_Methylococcales_50_91
SCNpilot_BF_INOC_scaffold_3185_8
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6045..6491)
DNA (447bp) protein (149aa)
hypothetical protein id=12495582 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Lipoprotein, putative {ECO:0000313|EMBL:EEG08530.1}; Flags: Precursor;; TaxID=279714 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" sour
hypothetical protein
SCNpilot_BF_INOC_scaffold_3185_9
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6599..8125)
DNA (1527bp) protein (509aa)
emrB; multidrug resistance protein B id=12495583 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Multidrug resistance protein B {ECO:0000313|EMBL:ERE07060.1}; TaxID=1388764 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseud
emrB; multidrug resistance protein B
SCNpilot_BF_INOC_scaffold_3185_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8136..9278)
DNA (1143bp) protein (381aa)
efflux pump membrane protein; K03543 multidrug resistance protein A id=12495584 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
efflux pump membrane protein; K03543 multidrug resistance protein A Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
efflux pump membrane protein
SCNpilot_BF_INOC_scaffold_3185_11

Not on your lists

comp(9275..10702)
DNA (1428bp) protein (476aa)
efflux transporter, outer membrane factor lipoprotein, NodT family id=12495585 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Putative fusaric acid resistance protein fusA {ECO:0000313|EMBL:BAD81003.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
membrane protein
SCNpilot_BF_INOC_scaffold_3185_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10699..11208)
DNA (510bp) protein (170aa)
emrR; EmrR; K15974 MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB id=12495586 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
emrR; EmrR; K15974 MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
emrR; EmrR
Displaying 12 items

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