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SCNpilot_BF_INOC_scaffold_3420

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_3420_1
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..885)
DNA (885bp) protein (295aa)
cytochrome c class I id=12493375 bin=THIO_HI species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=THIO_HI organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:ETX06847.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
cytochrome c class I
SCNpilot_BF_INOC_scaffold_3420_2
Thiobacillus sp. SCN1, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(908..1144)
DNA (237bp) protein (79aa)
id=12493374 bin=THIO_HI tax=THIO_HI organism_group=Betaproteobacteria
id=12493374 bin=THIO_HI tax=THIO_HI organism_group=Betaproteobacteria
SCNpilot_BF_INOC_scaffold_3420_3
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1141..2127)
DNA (987bp) protein (329aa)
Cbb3-type cytochrome oxidase, cytochrome c subunit id=12493373 bin=THIO_HI species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=THIO_HI organism_group=Betaproteobacteria
Cbb3-type cytochrome oxidase, cytochrome c subunit {ECO:0000313|EMBL:EIG63727.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;"
Cbb3-type cytochrome oxidase, cytochrome c subunit
SCNpilot_BF_INOC_scaffold_3420_4
Bizionia argentinensis, Bizionia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2124..3566)
DNA (1443bp) protein (481aa)
cytochrome-c oxidase (EC:1.9.3.1); K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1] id=12493372 bin=THIO_HI species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=THIO_HI organism_group=Betaproteobacteria
cytochrome-c oxidase (EC:1.9.3.1)
Cytochrome C and Quinol oxidase polypeptide I family protein {ECO:0000313|EMBL:EGV44573.1}; TaxID=1046627 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bizioni
SCNpilot_BF_INOC_scaffold_3420_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3877..4332)
DNA (456bp) protein (152aa)
bacterioferritin comigratory protein; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15] id=12493371 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
bacterioferritin comigratory protein; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
bacterioferritin comigratory protein
SCNpilot_BF_INOC_scaffold_3420_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4351..5013)
DNA (663bp) protein (221aa)
hypothetical protein id=12493370 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3420_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5028..5984)
DNA (957bp) protein (319aa)
thioredoxin reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] id=12493369 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
thioredoxin reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
thioredoxin reductase (EC:1.8.1.9)
SCNpilot_BF_INOC_scaffold_3420_8
unknown

Not on your lists

comp(6370..7053)
DNA (684bp) protein (228aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_3420_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7252..7476)
DNA (225bp) protein (75aa)
hypothetical protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
Putative uncharacterized protein id=3866950 bin=GWF2_Geobacter_54_21 species=Burkholderia pseudomallei genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
SCNpilot_BF_INOC_scaffold_3420_10
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7615..7821)
DNA (207bp) protein (69aa)
Tax=RBG_16_Betaproteobacteria_58_11_curated
SCNpilot_BF_INOC_scaffold_3420_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7977..8324
DNA (348bp) protein (116aa)
DNA translocase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family id=12493368 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
DNA translocase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family Tax=GWE1_Thiobacillus_62_9_curated
DNA translocase FtsK
SCNpilot_BF_INOC_scaffold_3420_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8321..8953
DNA (633bp) protein (211aa)
4-diphosphocytidyl-2C-methyl-D-erythritol synthase; K00991 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] id=12493367 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
4-diphosphocytidyl-2C-methyl-D-erythritol synthase; K00991 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
4-diphosphocytidyl-2C-methyl-D-erythritol synthase
Displaying 12 items

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