ggKbase home page

SCNpilot_BF_INOC_scaffold_3468

Search features with annotation key words

Displaying 19 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_3468_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..522)
DNA (522bp) protein (174aa)
4Fe-4S ferredoxin protein id=12493596 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
4Fe-4S ferredoxin protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
4Fe-4S ferredoxin
SCNpilot_BF_INOC_scaffold_3468_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

621..1106
DNA (486bp) protein (162aa)
P-loop hydrolase; K06925 UPF0079 ATP-binding protein id=12493595 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3468_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1088..2308
DNA (1221bp) protein (407aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28); K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] id=12493594 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:AAZ97472.1}; EC=3.5.1.28 {ECO:0000313|EMBL:AAZ97472.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hyd
SCNpilot_BF_INOC_scaffold_3468_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2305..2775
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035E043F
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3468_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2772..4550
DNA (1779bp) protein (593aa)
DNA mismatch repair protein MutL; K03572 DNA mismatch repair protein MutL id=12493592 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
DNA mismatch repair protein MutL; K03572 DNA mismatch repair protein MutL Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
DNA mismatch repair protein MutL
SCNpilot_BF_INOC_scaffold_3468_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4618..5019
DNA (402bp) protein (134aa)
hypothetical protein id=12493591 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3468_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5100..5552
DNA (453bp) protein (151aa)
hypothetical protein id=12493590 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3468_8
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5689..6711)
DNA (1023bp) protein (341aa)
fructose-bisphosphate aldolase (EC:4.1.2.13); K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13] id=12493589 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Fructose-bisphosphate aldolase (EC:4.1.2.13); K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13] Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
fructose-bisphosphate aldolase (EC:4.1.2.13)
SCNpilot_BF_INOC_scaffold_3468_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6868..7809
DNA (942bp) protein (314aa)
tRNA isopentenyltransferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] id=12493588 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
tRNA isopentenyltransferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=GWE1_Thiobacillus_62_9_curated
tRNA isopentenyltransferase (EC:2.5.1.75)
SCNpilot_BF_INOC_scaffold_3468_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7819..8061)
DNA (243bp) protein (81aa)
exodeoxyribonuclease VII large subunit (EC:3.1.11.6); K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6] id=12493587 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
exodeoxyribonuclease VII large subunit (EC:3.1.11.6); K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6] Tax=GWE1_Thiobacillus_62_9_curated
exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
SCNpilot_BF_INOC_scaffold_3468_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9417..10022
DNA (606bp) protein (202aa)
ExbB-like biopolymer transport; K03561 biopolymer transport protein ExbB id=12493586 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ExbB-like biopolymer transport; K03561 biopolymer transport protein ExbB Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
exbB-like biopolymer transport
SCNpilot_BF_INOC_scaffold_3468_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10026..10442
DNA (417bp) protein (139aa)
biopolymer transport ExbD-related transmembrane protein; K03559 biopolymer transport protein ExbD id=12493585 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
biopolymer transport ExbD-related transmembrane protein; K03559 biopolymer transport protein ExbD Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
biopolymer transport exbD-related transmembrane protein
SCNpilot_BF_INOC_scaffold_3468_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10451..11440
DNA (990bp) protein (330aa)
lipid-A-disaccharide synthase (EC:2.4.1.182); K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] id=12493584 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
lipid-A-disaccharide synthase (EC:2.4.1.182); K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] Tax=GWE1_Thiobacillus_62_9_curated
lipid-A-disaccharide synthase (EC:2.4.1.182)
SCNpilot_BF_INOC_scaffold_3468_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11475..12557
DNA (1083bp) protein (361aa)
diguanylate cyclase id=12493583 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
diguanylate cyclase Tax=GWE1_Thiobacillus_62_9_curated
diguanylate cyclase
SCNpilot_BF_INOC_scaffold_3468_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12572..12757
DNA (186bp) protein (62aa)
tetraacyldisaccharide-1-P 4'-kinase; K09791 hypothetical protein id=12493582 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
tetraacyldisaccharide-1-P 4'-kinase; K09791 hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
tetraacyldisaccharide-1-P 4'-kinase
SCNpilot_BF_INOC_scaffold_3468_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12776..13534
DNA (759bp) protein (253aa)
3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38); K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] id=12493581 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38); K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curat
3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
SCNpilot_BF_INOC_scaffold_3468_17
Saitoella complicata, Saitoella, Ascomycota, Fungi

Not on your lists

comp(13623..14153)
DNA (531bp) protein (177aa)
Adenylate kinase n=1 Tax=Strigomonas culicis RepID=S9VVL9_9TRYP
Uncharacterized protein {ECO:0000313|EMBL:GAO51897.1}; TaxID=698492 species="Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Taphrinomycotina incertae sedis; Saitoella.;" source="Saitoella co
SCNpilot_BF_INOC_scaffold_3468_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14415..14645
DNA (231bp) protein (77aa)
hypothetical protein id=12493579 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_3468_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14746..14913
DNA (168bp) protein (56aa)
6-phosphofructokinase (EC:2.7.1.90); K00850 6-phosphofructokinase [EC:2.7.1.11] id=12497170 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
6-phosphofructokinase (EC:2.7.1.90); K00850 6-phosphofructokinase [EC:2.7.1.11] Tax=GWE1_Thiobacillus_62_9_curated
6-phosphofructokinase (EC:2.7.1.90)
Displaying 19 items

View Taxonomy